DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14411 and mtm1

DIOPT Version :9

Sequence 1:NP_001162756.1 Gene:CG14411 / 32408 FlyBaseID:FBgn0030582 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001032773.2 Gene:mtm1 / 560881 ZFINID:ZDB-GENE-051113-128 Length:639 Species:Danio rerio


Alignment Length:744 Identity:171/744 - (22%)
Similarity:289/744 - (38%) Gaps:202/744 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IVASAP--AYMYSPIDPMDSSGGSGSTLSAISSASGT--PADRH-----------HKEATFGLLS 118
            ::||||  .|..||:....|...|..:|.....|..|  |.:..           :..|..|.:.
Zfish    33 VMASAPIAPYNSSPLGNSSSQNASRESLKMEPLADVTLLPGEERVIDKDIIYICPYNAAVKGKVF 97

  Fly   119 VTNFKLAFVPLHEKRNQAITAPLIDLYQENTYLGRNEITLN-NIDHIYTITELGRAASALQAARG 182
            :||::|.|      :|.....|               :||| .:..|..:.::|.|:|     ||
Zfish    98 ITNYRLYF------KNTDSETP---------------VTLNIPLGVISRVEKMGGASS-----RG 136

  Fly   183 MASHAGMSRRKKLEPFKQQNISGRIAALHIVCKNFRLLKFAFQQQDSKMFGASDQGKLIASALVR 247
            ..|:                      .|.|.||:.|.|:||.:|:     |.|.:.  |...:.:
Zfish   137 ENSY----------------------GLEITCKDMRNLRFALKQE-----GHSRRD--IFEIIFK 172

  Fly   248 FAYPMRHDLS-FAYAHREPYYSTLGASGTSMYATKNDWARELIRCGATEWQVVSC-ASVQLLQNP 310
            :|:|:.|.:. ||:..:|.|..    :|.::|....::.|:.:  ...||:|... .:.:|..  
Zfish   173 YAFPLSHGMQLFAFLSQEKYEE----NGWNVYEALEEYRRQGL--PNNEWRVTFINKNYELCD-- 229

  Fly   311 LQAGKYTVPPHFVIPKSCSVD--RFLDLSRAFCDSRAAFWVYSYGSSAALVRLAE-LQPAAQQDT 372
                  |.|...|:|...:.|  |.:...|:.|......|.:. .:.|.:.|.:: |...:.:..
Zfish   230 ------TYPTILVVPYKATEDDLRKVATFRSRCRIPVMSWFHK-ENHAVITRCSQPLVGMSGKRN 287

  Fly   373 KSENVMLELVRKCDAGRQLKLLQLTDRLPSIQDVLR-----------AYQ--------------- 411
            |.:...|:|:|:.:...:|.:.   |..|::..|..           |||               
Zfish   288 KDDERYLDLIREANGTTKLTIY---DARPNVNAVANKATGGGYEGDDAYQNAELVFLDIHNIHVM 349

  Fly   412 -----KLRRLCTPETPEKFMLQDDKYLGLLEKTNWLFYVSLCLRYASEASATLRSGVTCVLQESN 471
                 ||:.:..|.      :::..:|..||.|:||.::.|.|..|.:.:..:.||.:.::..|:
Zfish   350 RESLKKLKDIVYPN------VEESHWLSSLESTHWLEHIKLVLSGAIQVADKVSSGSSVMVHCSD 408

  Fly   472 GRDLCCVISSLAQLLLDPHFRTIDGFQSLVQKEWVALEHPFQRRLGHVYPAQPAGGNAELFDSEQ 536
            |.|....::||:.|:||.::||:.|||.|::|||::..|.|..|:||        |:....|.::
Zfish   409 GWDRTAQLTSLSMLMLDSYYRTLRGFQVLMEKEWISFGHKFASRIGH--------GDKNHADQDR 465

  Fly   537 SPVFLLFLDCVWQLLQQFPDEFEFTQTYLTTLWDSCFMPIFDTFQFDTQAQRLKAVTDSQLV-LR 600
            ||:||.|:|||||:.:|||..|||.:..|..:.|..:...|.||.::.:     :|.||..| .:
Zfish   466 SPIFLQFIDCVWQMTKQFPTAFEFNERLLVVILDHLYSCRFGTFLYNCE-----SVRDSNNVRTK 525

  Fly   601 PVWDWGEQFSDKDKMFFSNPLYQRQRGDLGAQAAAVAHRRSLAVGSKGAHGAASGVTPSRNTINP 665
            .|..|  .:.:.|...:.||.|                                  ||.      
Zfish   526 TVSLW--SYINSDTSLYINPFY----------------------------------TPE------ 548

  Fly   666 QLFATASSVPQDRYLQPAHRIFDLQVWDQCYYRWLPILDIRGGGQPQVDLYHRLLLSNIAKVQRC 730
                      ..|.|.|...:..|::|...|.||.|.:. .....|....|..||......:::.
Zfish   549 ----------SSRVLYPVASMRHLELWVTYYIRWNPRIQ-HQQQSPVEQRYKELLALRDQYLKKL 602

  Fly   731 LDYQNFDDLPDAYY----EFAGESRPNQH 755
            .:.|..|..|.:.:    .....:.||||
Zfish   603 EELQLSDSAPSSTHLTNSSTPNAATPNQH 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14411NP_001162756.1 PH-like <114..225 CDD:302622 25/111 (23%)
PTPc <400..587 CDD:304379 64/217 (29%)
3-PAP <666..732 CDD:289355 13/65 (20%)
mtm1NP_001032773.2 PH-like 77..176 CDD:327399 31/153 (20%)
Myotub-related 199..517 CDD:310891 88/350 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590797
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.