DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14411 and Mtmr6

DIOPT Version :9

Sequence 1:NP_001162756.1 Gene:CG14411 / 32408 FlyBaseID:FBgn0030582 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001381640.1 Gene:Mtmr6 / 305935 RGDID:1305378 Length:655 Species:Rattus norvegicus


Alignment Length:579 Identity:127/579 - (21%)
Similarity:213/579 - (36%) Gaps:179/579 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 NQAITAPL---------IDLYQENTYLGRNEITLNNIDHIYTITELGRAASALQAARGMASHAGM 189
            |:::|..|         ||.:|:.|::..:        ||.::.:|....|.             
  Rat    22 NKSLTGTLYLTATHLLFIDAHQKETWILHH--------HIASVEKLALTTSG------------- 65

  Fly   190 SRRKKLEPFKQQNISGRIAALHIVCKNFRLLKFAFQQQDSKMFGASDQGKLIASALVRFAYPMRH 254
                              ..|.|.|||||::.|...::..    ..|    |.::|::.:...::
  Rat    66 ------------------CPLVIQCKNFRIVHFIVPRERD----CHD----IYNSLLQLSKQAKY 104

  Fly   255 DLSFAYAHREPYYSTLGASGTSMYATKNDWARELIRCGA--TEWQVVSCASVQLLQNPLQAGKY- 316
            :..:|:::......|...:|..:.    |.|.|..|.|.  ..||         |.:..:..|. 
  Rat   105 EDLYAFSYNPKQNDTERLNGWQLI----DLAAEYERMGVPNANWQ---------LSDANREYKVC 156

  Fly   317 -TVPPHFVIPKSCSVDRFLDLSRAFCDSRAAFWVYSY---GSSAALVRLAELQPAAQQDTKSENV 377
             |.|....:|::.|  |.:.:..:...|:....|.||   |:.||:.|.::...........:..
  Rat   157 ETYPRELYVPRTAS--RPVIVGSSNFRSKGRLPVLSYCQQGTEAAICRCSQPLSGFSARCLEDEH 219

  Fly   378 MLELVRKCDAGRQLKLLQLTDRLPSI---------QDVLRAY----------QKLRRLCTPETPE 423
            :|:.:.|.:.|.  :.:.:.|..|.:         :|:.|..          :|:|     |:.|
  Rat   220 LLQAISKANPGN--RYMYVVDTRPKLRMQSWWDTQKDIGRIIVRISSKIWNDEKIR-----ESDE 277

  Fly   424 KFML-------------QDDKYLGL-------------------------------------LEK 438
            |..|             .:|.|..:                                     ||.
  Rat   278 KKRLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGSKGLSVNDFYSGLES 342

  Fly   439 TNWLFYVSLCLRYA-SEASATLRSGVTCVLQESNGRDLCCVISSLAQLLLDPHFRTIDGFQSLVQ 502
            :.||.::...|..| ..|.|.:....:.::..|:|.|....:.||..||||.::||:.||..|::
  Rat   343 SGWLRHIKAVLDAAIFLAKAIVVENASVLVHCSDGWDRTSQVCSLGSLLLDSYYRTMKGFMVLIE 407

  Fly   503 KEWVALEHPFQRRLGHVYPAQPAGGNAELFDSEQSPVFLLFLDCVWQLLQQFPDEFEFTQTYLTT 567
            |:|::..|.|..|.||: ...|         .|.||||..||:|||.|.:|||..|||.:.:|..
  Rat   408 KDWISFGHKFSERCGHL-DGDP---------KEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQ 462

  Fly   568 LWD---SC-FMPIFDTFQFDTQAQRLKAVTDSQLVLRPVWDWGEQFSDKDKMFFSNPLY 622
            :.:   || |.......|.:.:..|||..|.|.        |....:||.|  :.||||
  Rat   463 IHEHIHSCQFGNFLGNCQKEREELRLKEKTYSL--------WPFLLADKKK--YLNPLY 511

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG14411NP_001162756.1 PH-like <114..225 CDD:302622 19/99 (19%)
PTPc <400..587 CDD:304379 63/260 (24%)
3-PAP <666..732 CDD:289355
Mtmr6NP_001381640.1 Interaction with RAB1B. /evidence=ECO:0000250|UniProtKB:Q8VE11 2..141 30/169 (18%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q13614 286..289 0/2 (0%)