DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14411 and Mtm1

DIOPT Version :9

Sequence 1:NP_001162756.1 Gene:CG14411 / 32408 FlyBaseID:FBgn0030582 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_038967748.1 Gene:Mtm1 / 288762 RGDID:1304582 Length:603 Species:Rattus norvegicus


Alignment Length:732 Identity:168/732 - (22%)
Similarity:279/732 - (38%) Gaps:241/732 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GLLSVTNFKLAFVPLHEKRNQAITAPLIDLYQENTYLGRNEITLNNIDHIYTITELGRAASALQA 179
            |.|.:||::|....|     :...||::|:               .:..|..|.::|...|    
  Rat    61 GRLYITNYRLYLRSL-----ETDLAPILDV---------------PLGVISRIEKMGGVTS---- 101

  Fly   180 ARGMASHAGMSRRKKLEPFKQQNISGRIAALHIVCKNFRLLKFAFQQQDSKMFGASDQGKLIASA 244
             ||..|:                      .|.|.||:.|.|:||.:|:     |.|.:.  |...
  Rat   102 -RGENSY----------------------GLDITCKDLRNLRFALKQE-----GHSRRD--IFDV 136

  Fly   245 LVRFAYPMRHDLS-FAYAHREPYYSTLGASGTSMYATKNDWARELIRCGATE--WQVVSCASVQL 306
            |.|.|:|:.::|. ||:.:.|.:    ...|.::|....::.|:    |..:  |::        
  Rat   137 LTRHAFPLAYNLPLFAFVNEEKF----KVDGWAIYNPVEEYRRQ----GLPDRHWRI-------- 185

  Fly   307 LQNPLQAGKY----TVPPHFVIPKSCSVDRFLDLSRAFCDSRAAF----------WVYSYGSSAA 357
               .....:|    |.|...|:|...|.|   ||.|.     |.|          |::. .:.||
  Rat   186 ---SFVNQRYELCDTYPALLVVPYRASDD---DLRRV-----ATFRSRNRIPVLSWIHP-ENRAA 238

  Fly   358 LVRLAE-LQPAAQQDTKSENVMLELVRKCDAGRQLKLLQLTDRLPSIQDVLR-----------AY 410
            ::|.:: |.....:.::.:...|:::|  :..:|...|.:.|..|.:..|..           ||
  Rat   239 IMRCSQPLVGVGGKRSRDDERYLDIIR--ETNKQTSKLTIYDARPGVNAVANKATGGGYEGEDAY 301

  Fly   411 -----------------QKLRRLCTPETPEKFMLQDDKYLGLLEKTNWLFYVSLCLRYASEASAT 458
                             :.|||:.....|.   :::..:|..||.|:||.::.|.|..|...:..
  Rat   302 PHAELSFLDIHNIHVMRESLRRVRDIVYPH---VEEAHWLSSLESTHWLEHIKLLLTGAIRVADK 363

  Fly   459 LRSGVTCVLQE-SNGRDLCCVISSLAQLLLDPHFRTIDGFQSLVQKEWVALEHPFQRRLGHVYPA 522
            :.||::.||.. |:|.|....:::||.|:||..:|:|:||:.||||||::..|.|..|:||    
  Rat   364 VASGLSSVLVHCSDGWDRTAQLTTLAMLMLDGFYRSIEGFEILVQKEWISFGHKFSSRIGH---- 424

  Fly   523 QPAGGNAELFDSEQSPVFLLFLDCVWQLLQQFPDEFEFTQTYLTTLWDSCFMPIFDTFQFDTQAQ 587
                |:....|:::||:||.|:|||||:.:|||..|||.:.:|..:.|..:...|.||..:.:|.
  Rat   425 ----GDKNHADADRSPIFLQFIDCVWQMTKQFPTAFEFNECFLVAILDHLYSCRFGTFLLNCEAA 485

  Fly   588 RLKAVTDSQLVLRPVWDWGEQFSDKDKMFFSNPLYQRQRGDLGAQAAAVAHRRSLAVGSKGAHGA 652
            |.:    .:|..|.|..|....|:||:  |:||.|.|:                           
  Rat   486 RER----QRLAERTVSVWSLINSNKDE--FTNPFYARE--------------------------- 517

  Fly   653 ASGVTPSRNTINPQLFATASSVPQDRYLQPAHRIFDLQVWDQCYYRWLPILDIRGGGQPQVDLYH 717
                                   .:|.:.|...:..|::|...|.||.|.:. :....|....|:
  Rat   518 -----------------------SNRVIYPVTSVRHLELWVNYYIRWNPRIR-QQQPHPMEQRYN 558

  Fly   718 RLLLSNIAKVQRCLDYQNFDDLPDAYYEFAGESRPNQHKDEKPDKEDEAEFVDGVERRRKPT--A 780
            .||.                 |.|.|.:                |.:|.:..       .||  .
  Rat   559 ELLA-----------------LRDDYIK----------------KLEELQLA-------TPTKLT 583

  Fly   781 KAATPTSGLTSVTGNLQ 797
            .::||.||...:...:|
  Rat   584 DSSTPPSGSAQIAPRMQ 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14411NP_001162756.1 PH-like <114..225 CDD:302622 24/109 (22%)
PTPc <400..587 CDD:304379 67/215 (31%)
3-PAP <666..732 CDD:289355 12/65 (18%)
Mtm1XP_038967748.1 PH-like 44..143 CDD:418428 31/135 (23%)
Myotub-related 162..489 CDD:399535 96/367 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349523
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.