DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14411 and Mtmr4

DIOPT Version :9

Sequence 1:NP_001162756.1 Gene:CG14411 / 32408 FlyBaseID:FBgn0030582 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_006532446.1 Gene:Mtmr4 / 170749 MGIID:2180699 Length:1204 Species:Mus musculus


Alignment Length:826 Identity:180/826 - (21%)
Similarity:293/826 - (35%) Gaps:258/826 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 DLYQENTYLGRNEITLNNIDHIYTITE------LGRAASALQAARGMASHAGMSRRKKLEPFKQ- 200
            ||:.....:...|    |:...:|:.:      ||||..||.|......|..........|.:. 
Mouse    30 DLFPPKELVKEEE----NLQVPFTVLQGEGVEFLGRATDALIAISNYRLHIKFKDSVINVPLRMI 90

  Fly   201 QNISGR-IAALHIVCKNFRLLKFAF------QQQDSKMFGASDQGKLIASALVRFAYPMRHDLSF 258
            .::..| :..|||.||:.::::..|      |:..|::..|:             |.|.:.:..|
Mouse    91 DSVESRDMFQLHIACKDSKVVRCHFSTFKQCQEWLSRLSRAT-------------ARPAKPEDLF 142

  Fly   259 AYAH--------REPYYSTLGASGTSMYATKNDWARELIRCG---ATEWQVVSCASVQLLQNPLQ 312
            |:|:        .|..::.|...|..:...:.   .||.|.|   ...|:|....|         
Mouse   143 AFAYHAWCLGLTEEDQHTHLCQPGEHIRCRQE---AELARMGFDLQNVWRVSHINS--------- 195

  Fly   313 AGKYTVPPHFVIPKSCSV-----DRFLDLSRAFCD-SRAAFWVYSY-GSSAALVRLAELQPAAQ- 369
              .|.:.|.:  |:...|     |:.|:...:|.. .|....||.: .:.||:.|.:  ||... 
Mouse   196 --NYKLCPSY--PQKLLVPVWITDKELENVASFRSWKRIPVVVYRHLRNGAAIARCS--QPEISW 254

  Fly   370 ---QDTKSENVMLELVRKC--DAGRQL-------------------------------------K 392
               ::...|.::..:.:.|  |.|.:.                                     |
Mouse   255 WGWRNADDEYLVTSIAKACALDPGTRASGGSLSTGTNDASEACDTDFDSSLTACSGVESTAAPQK 319

  Fly   393 LLQLTDR------------------------------LPSIQDVLRAYQKLRRLCTPETPEKFML 427
            ||.|..|                              :.:|..:..::|.||.:|:.      |.
Mouse   320 LLILDARSYTAAVANRAKGGGCECEEYYPNCEVLFMGMANIHAIRNSFQYLRAVCSQ------MP 378

  Fly   428 QDDKYLGLLEKTNWLFYVSLCLRYASEASATL-RSGVTCVLQESNGRDLCCVISSLAQLLLDPHF 491
            ....:|..||.|.||.::|:.|:.|...:.|: |.|...::..|:|.|....|.:||::||||::
Mouse   379 DPSNWLSALESTKWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYY 443

  Fly   492 RTIDGFQSLVQKEWVALEHPFQRRLGHVYPAQPAGGNAELFDSEQSPVFLLFLDCVWQLLQQFPD 556
            ||::|||.||:.:|:...|.|..|.||...|:.        .:||.||||.:||.|.|||:|||.
Mouse   444 RTLEGFQVLVESDWLDFGHKFGDRCGHQENAED--------QNEQCPVFLQWLDSVHQLLKQFPC 500

  Fly   557 EFEFTQTYLTTLWDSCFMPIFDTFQFDTQAQRLKAVTDSQLVLRPVWDWGEQFSDKDKMFFSNPL 621
            .|||.:.:|..|....:..::.||                                   ..:||.
Mouse   501 LFEFNEAFLVKLVQHTYSCLYGTF-----------------------------------LANNPC 530

  Fly   622 YQRQRGDLGAQAAAVAHRRSLAV------GSKGAHGAASGVTPSRNTINPQLFATASSVPQDRYL 680
            .:.:|.         .::|:.:|      |:|..|..              |:...|.|    .|
Mouse   531 EREKRN---------IYKRTCSVWALLRAGNKNFHNF--------------LYTPGSDV----VL 568

  Fly   681 QPAHRIFDLQVWDQCYYRWLPILDIRGGGQPQVDLYHRLLLSNIAKVQ----RCLD----YQNFD 737
            .|...:..|.:|...|   ||.......|:..:|||    ||.:|:.|    |.||    .::.|
Mouse   569 HPVCHVRALHLWTAVY---LPASSPCTLGEENMDLY----LSPVAQSQEFSGRSLDRLPKTRSMD 626

  Fly   738 DLPDAYYEFAGESRPNQHKDEKPDKEDEAEFVDG-VERRRKPTAKAATPTSGLTSVTGNLQLSTL 801
            ||..|    ...|.|.......|:..:.::.|.| :|........|.|.   :.|..|:.||:..
Mouse   627 DLLSA----CDTSSPLTRTSSDPNLNNHSQEVRGSLEPWHSSPEGAETV---IDSGVGSPQLTVG 684

  Fly   802 SSFFP-----------FGNPIAGDAPLQL-YDILSSSSELLMETSS 835
            ....|           ...|..|.....| |.:|::|....|::::
Mouse   685 EMGLPPPLPSSQKEYLSNKPFKGHKSCSLSYKLLNTSVSWEMKSNT 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14411NP_001162756.1 PH-like <114..225 CDD:302622 21/95 (22%)
PTPc <400..587 CDD:304379 64/187 (34%)
3-PAP <666..732 CDD:289355 19/69 (28%)
Mtmr4XP_006532446.1 PH-GRAM_MTMR4 37..150 CDD:270150 27/129 (21%)
PTP-MTMR4 186..493 CDD:350435 78/335 (23%)
Atrophin-1 743..>863 CDD:367360
FYVE_MTMR4 1120..1179 CDD:277272
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846055
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.