DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14411 and sbf1

DIOPT Version :9

Sequence 1:NP_001162756.1 Gene:CG14411 / 32408 FlyBaseID:FBgn0030582 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_012813917.1 Gene:sbf1 / 100125154 XenbaseID:XB-GENE-1013544 Length:1923 Species:Xenopus tropicalis


Alignment Length:648 Identity:142/648 - (21%)
Similarity:241/648 - (37%) Gaps:196/648 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 IDLYQENTYLGRNEITLNNI--DHIYTITELGRAASALQAAR-GMASHAGMSRRKKLEPFKQQNI 203
            |.|.:|   :.||.:|.:.:  ....||..:...|......| |:.:.:...:|.|.|||:...:
 Frog  1108 ISLSEE---MERNTLTTSTLKAPEKQTIGNVAERACCRDYQRMGLGTLSNSLQRSKNEPFRISTV 1169

  Fly   204 SGRIAALHIVCKNF-RLLKFAFQQQDSKMFGASDQGKLIASALVRFAYPM--------------- 252
            :    .::.||.:: .||......||:.:       :.|:....:..:|:               
 Frog  1170 N----RMYAVCNSYPGLLIVPHSIQDNTL-------QKISRCYRQNRFPVVCWRSPRSKAVLLRS 1223

  Fly   253 --RHDLSFAYAHREPYYSTLGASGTSMYATKND-WARELIRC----------------------- 291
              .|........:.|..:.:|.|.|...:.:.: :.:.::.|                       
 Frog  1224 GGLHGKGVVGLFKSPNTTAVGQSQTDSTSLEQEKYLQAVVNCMPRFAEMSGRNTLSAFPSAHLYD 1288

  Fly   292 ---------GATEWQVVSCA-------SVQLLQNP------LQAGKYTVPPHFVIPKSCSVDRFL 334
                     |:...||:...       ||:.:::|      ::.||:.                 
 Frog  1289 SPDKRQPKLGSLMKQVIGGKEDNRGGYSVRGIKHPAVRRGYIEQGKWG----------------- 1336

  Fly   335 DLSRAFCDSRAAFWVYSYGSSAAL-VRLA--ELQPAAQQDTKSENVM------LELVR------- 383
                   ..|.:..:.:|..::.: .|||  ||....|....||:.:      |.::.       
 Frog  1337 -------SMRGSGRLSAYAMNSDVGTRLAGRELVTHNQNGGPSESALTPRRAALYIIGDKSQLKG 1394

  Fly   384 -KCDAGRQLKLLQLTDRLPSIQDVLRAYQKLRRLCTPETPEKFMLQDDKYLGLLEKTNWLFYVSL 447
             |.|..:|.:|:.:  .|..::.|..:::||.:.|.|..|.....|  .||..||.:.||..:..
 Frog  1395 VKQDPLQQWELVPI--ELFDVRQVKGSFKKLMKACVPSAPSSDPSQ--SYLRTLEDSEWLVQLHK 1455

  Fly   448 CLRYASEASATLRSGVTCVLQESNGRDLCCVISSLAQLLLDPHFRTIDGFQSLVQKEWVALEHPF 512
            .|:.:......|.||.:.::...:|.||...:.||.|||.||::|||:||:.||:|||::..|.|
 Frog  1456 LLQVSVLVVELLDSGSSVLVGLEDGWDLTTQVVSLVQLLSDPYYRTIEGFRLLVEKEWLSFGHRF 1520

  Fly   513 QRRLGHVYPAQPAGGNAELFDSEQSPVFLLFLDCVWQLLQQFPDEFEFTQTYLTTLWDSCFMPIF 577
            ..|..|...:|..|         .:||||.|||||.|:..|||.||||:|.||..|........|
 Frog  1521 SHRGAHTAASQSNG---------FTPVFLQFLDCVHQVHLQFPSEFEFSQYYLKFLAYHYVSNRF 1576

  Fly   578 DTFQFDTQAQRL--------KAVTDSQLVLRPVWDWGEQFSDKDKMFFSNPLYQRQRGDLGAQAA 634
            .||..|:..:|:        |....|..|.|.||:..|:...|..:|: |.::..:.|::     
 Frog  1577 RTFLLDSDCERIEKGVLYEEKGDRRSPQVCRSVWECMERLHKKSPVFY-NYMFSPEDGEV----- 1635

  Fly   635 AVAHRRSLAVGSKGAHGAASGVTPSRNTINPQLFATASSVPQDRYLQPAHRIFDLQVWDQCYY 697
                                                         |:|...::.|:|||  ||
 Frog  1636 ---------------------------------------------LRPFSSVWGLRVWD--YY 1651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14411NP_001162756.1 PH-like <114..225 CDD:302622 20/86 (23%)
PTPc <400..587 CDD:304379 69/186 (37%)
3-PAP <666..732 CDD:289355 8/32 (25%)
sbf1XP_012813917.1 uDENN 1..86 CDD:214824
DENN 117..306 CDD:214823
dDENN 360..428 CDD:129037
SBF2 538..754 CDD:289132
PH-GRAM_MTMR5 883..1001 CDD:275417
Myotub-related 1142..1586 CDD:284109 113/491 (23%)
PH_Sbf1_hMTMR5 1816..1921 CDD:269941
PH 1820..1921 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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