DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14408 and pcs

DIOPT Version :10

Sequence 1:NP_727792.2 Gene:CG14408 / 32407 FlyBaseID:FBgn0030581 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_611010.4 Gene:pcs / 36674 FlyBaseID:FBgn0033988 Length:477 Species:Drosophila melanogaster


Alignment Length:585 Identity:167/585 - (28%)
Similarity:244/585 - (41%) Gaps:147/585 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTESNTPVDPRVQVELEKLNSATDNINRYEVELDEAKCEFKRLLAESVVRIKAAAHKLGNSIDA 65
            ||:..:..:||::|:|||.||||||.||:.|:||:||...|:.||.||..|:|.::.||||.|:.
  Fly     1 MSSAEDGELDPQIQIELENLNSATDEINKLEIELEEANSTFRILLNESTRRLKVSSKKLGNCIEK 65

  Fly    66 AKPYYESRIYAAQLAKETQLAAANHEKAKSIHAAAKEMVYLAEQGLGEKS---TLDTACQEMLSH 127
            |:||||:...|.:...|.|.||...::|..|||||||.|.||||.....|   ..|.|.||||:|
  Fly    66 ARPYYEALDKAREAQIECQKAAVKFQRANEIHAAAKETVALAEQRFMSNSHEWQFDNAWQEMLNH 130

  Fly   128 AASKVNQSQLEVTDTRNALKMCQLKLEVANNRVGKLQGQLKQALRASRLQLKRNLLLLRYFSIMH 192
            |..||..::.:..|.....:........|..::.:|:.:.::::..||                 
  Fly   131 ATQKVMDAETQKADCHAEHQRLTKLFNAAEQKLQQLEDRFRRSINKSR----------------- 178

  Fly   193 ALYCTLCSPYYETRANYNGLLKAQKTRVNELEAKVSAAKLTYNEALKNLEQISEDIHRQRQQ--- 254
                    ||:|.:......|:.||.|:.||:.:|:.||.||:.||:|||:|||||||||..   
  Fly   179 --------PYFEEKQVCQDQLQTQKNRIQELQQQVAGAKSTYSTALRNLERISEDIHRQRGDFPT 235

  Fly   255 ----RNNLLNYEAMLRQVDAVDTL-TAGLERSSC---GTAANRQDLEAKAAAEEQKHVEAEAEEE 311
                |...:..|.......|:.:| ...||...|   ..|.::..|.||..       :|.||.|
  Fly   236 PPGPREPGVGAELNSPTSSALPSLPDFQLELEKCDYPSIAGSQMSLGAKTP-------QAAAETE 293

  Fly   312 EEEYLRMPERLGHHECPHLLTDFEAVLTFPQKLAGGMHKSASTGAA--------ADGEAGLGPLG 368
            :||          ..|     |::                 .|||.        .|.||....:.
  Fly   294 DEE----------DAC-----DYD-----------------ETGAGELRGVVDERDLEALRQKVK 326

  Fly   369 LHAPYEVKSGSGSLASGSASVSTSAGGAPADNDIEQW------TEIRLSH----SDSTSSSYSNQ 423
            :.|...::.|.|.                ..||:  |      |..:|.|    .::.....:|:
  Fly   327 ILAVRPIEGGDGQ----------------QQNDV--WEHELKATVDKLDHLMMLKETAKRQQTNR 373

  Fly   424 SLLEQQGLDSTGGMSGGLGLGLARNHLDADAQSQHSTSSSDEPKRKVT-CTTIFQDDSSASSGGG 487
            ....:|..||.|                |:|..:|    .|..:.||| |.|    .:|......
  Fly   374 LKSTEQRPDSLG----------------AEALKRH----CDVVEVKVTSCAT----TASLPVTPH 414

  Fly   488 QQMSRK------QSLSQWLSRSNSFKGSGRRQSLDLLIDAGDKVKDVFSYGFQKVGRSLERRNSE 546
            .|::..      :.|.|.|:...|...|.|  .|.||....:::.|..|..|..|.::|.||:.|
  Fly   415 HQLNHLAPPTPIKKLQQQLAPLPSVNVSMR--ELPLLARLSNELLDRSSAAFGGVRKTLRRRSLE 477

  Fly   547  546
              Fly   478  477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14408NP_727792.2 SH3BP5 9..256 CDD:461608 98/256 (38%)
pcsNP_611010.4 SH3BP5 8..235 CDD:461608 98/251 (39%)

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