DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rut and npr3

DIOPT Version :9

Sequence 1:NP_511156.2 Gene:rut / 32406 FlyBaseID:FBgn0003301 Length:2248 Species:Drosophila melanogaster
Sequence 2:XP_005165413.1 Gene:npr3 / 569395 ZFINID:ZDB-GENE-060531-91 Length:503 Species:Danio rerio


Alignment Length:550 Identity:104/550 - (18%)
Similarity:174/550 - (31%) Gaps:195/550 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 MP--LQIW-------------EAVAFGIALPSVHISLTVYKIFTDALRYLEYNQLIANIVIFIGV 196
            ||  |.||             :.:...:.||..:..|..|.....|:.|.:.....|:.      
Zfish     5 MPLCLSIWAVLMVPGRTSALNDNIEVMVMLPRNNTYLFSYTRVFPAIEYAKKALREADA------ 63

  Fly   197 NVAGLVVNIMMERAQRRTFLDTRNCIASRLEIQDENEKLER--LLLSVLPQHVAMQMKNDILSPV 259
             .|||..|:..|.:.         |....|....:.:|.||  |:|..:.::.|..:..      
Zfish    64 -YAGLRFNVRFENSA---------CGMDALYALVDRQKDERPDLVLGPVCEYAASSVTR------ 112

  Fly   260 AGQFHRIYIQKHENVSILFADIV--GFTVLSSQCSAQELVRL----------LNELFGRFD---- 308
                    :..|.|:.::.|..:  ||...:.:.|  .|.|:          ...:||.|.    
Zfish   113 --------VASHWNIPVISAGALATGFNSKTPEYS--HLTRIAPTYLKMAETFQAIFGHFGWRTA 167

  Fly   309 QLAHDNHCLRIKILGDCYYCVSGL------------------PEPRKDHAKCAVEMGLDMIDAIA 355
            .|.:|:.    |...:||:.:.|:                  .|.|.|.            |.|.
Zfish   168 YLIYDDD----KDERNCYFTMEGVFTVLSEYHISTDFAVLNSNEERVDP------------DGII 216

  Fly   356 TVVEATDVILNMRVGIHTGRVLCGVLGLRKWQFDVWSNDVTLANHMESGGEPGRVHVTRATLDSL 420
            |.|..::|:           ::|....:.:        |:.||.|.........:.......:|.
Zfish   217 TSVYGSEVV-----------IMCSKADIVR--------DLMLAAHRRKLTSDSHIFFNIELFNSS 262

  Fly   421 S---GEYEVEAGHGDE-RSSYLRDHGVDTFFIVPPPHRRKPLMLNTLG-VRS--------AIGSR 472
            |   |.:.....:.|| |::|                    ..|||:. :||        :|..:
Zfish   263 SYGDGSWRRRDKYDDEARAAY--------------------SFLNTVTLLRSTKPEFEDFSIEMK 307

  Fly   473 RKLSFRNVS--------NVVMQ------LLHTIKF----SEPVPFSN---IATGSFPSAASALGG 516
            :.|...|:.        |:.|:      ||:.|..    |:.:...|   |....:......:.|
Zfish   308 KSLQQSNIPICEDCSAVNMFMEGFHDALLLYAIALREVKSKGLTKKNGLEITHSMWNRTFEGIAG 372

  Fly   517 GVSVGGGGGGGGG-GVARGSTCEA-----------NSGNVQVSEKGSRKVIRLQKILHATPPPHG 569
            .||:...|...|. .|.|.:..|:           .:|:.|:.....|:...|:.|    |||..
Zfish   373 QVSLDANGDRNGDFSVVRMTDPESGKHETVMNYFGTNGSFQILPGFKREWFSLRTI----PPPKP 433

  Fly   570 MGYGSVVGSGGGVDSGISGGGGCVSGGIAG 599
            :.     .|.||:  |:|...|.:.|||.|
Zfish   434 LD-----PSSGGL--GVSAVTGIIVGGILG 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rutNP_511156.2 AC_N <17..255 CDD:292831 25/124 (20%)
CYCc 230..425 CDD:214485 39/233 (17%)
Guanylate_cyc 266..438 CDD:278633 36/209 (17%)
DUF1053 624..696 CDD:283888
SLC5-6-like_sbd <742..>893 CDD:294310
CYCc 924..1134 CDD:214485
Guanylate_cyc 954..1151 CDD:278633
npr3XP_005165413.1 Periplasmic_Binding_Protein_Type_1 29..416 CDD:299141 83/473 (18%)
ANF_receptor 46..389 CDD:279440 74/429 (17%)
TM_EphA1 436..468 CDD:214014 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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