DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rut and ACXE

DIOPT Version :9

Sequence 1:NP_511156.2 Gene:rut / 32406 FlyBaseID:FBgn0003301 Length:2248 Species:Drosophila melanogaster
Sequence 2:NP_652601.3 Gene:ACXE / 53426 FlyBaseID:FBgn0040506 Length:1123 Species:Drosophila melanogaster


Alignment Length:1317 Identity:316/1317 - (23%)
Similarity:526/1317 - (39%) Gaps:349/1317 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LECLYQRYTLKLQRFSVLGVVALVFVLCGVMAALSLTF--NNAATFHNIFNAIVCGLFAVVLVLL 85
            ||..::.|.::|.:..:|....|...:..|..||.|..  ..:..:.::..:|.|.|..::::.:
  Fly    32 LESEFRLYRIRLWKSYLLTFFMLHIFVTSVHCALLLATIERRSIIYFDVALSIGCALVLILVLSV 96

  Fly    86 Q-CSVIKDHHLPTLCYGILLFTASICVVSMPTLGSVFPVDTKEVMAEGVWQIVFVVFLAYAMMPL 149
            . |......| ....|...:| ||:.:|......|::.......:. |.:...:::::.|..:|:
  Fly    97 NFCDEFIAKH-TWYMYASSIF-ASLTLVFADLTESIYHTYAHSWIL-GTFYDTYIIYMIYMFLPI 158

  Fly   150 Q-IWEAVAFGIALPSVHISLTVYKI------FTDALRYLEYNQLIANIVIFIGVNVAGLVVNIMM 207
            . |..||...:.:..::|...|..|      |..||  .....:..:||.::.:|:.|:...:|.
  Fly   159 HFISGAVLLALLVSGLYILYFVIFIAQGFAQFASAL--FSVGGMSVDIVHYLCLNLVGIFYRVMN 221

  Fly   208 ERAQRRTFLDTRNCIASRLEIQDENEKLERLLLSVLPQHVAMQMKNDILSPVAGQFHRIY----- 267
            :...|.:|||....|..::.:::...:.::||.|:||..:::.::.||...:......|:     
  Fly   222 DTVVRSSFLDRHQYIKEKIWLRNARLQEKQLLDSILPPQISLPLQKDIQGRIVMAKQGIHSWTAM 286

  Fly   268 -----IQKHENVSILFADIVGFTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYY 327
                 ||.|.:||||:||:|.:|.|::..:.:.||::|::|:||||..|:.....|||.||||||
  Fly   287 ERTMAIQIHPDVSILYADVVNYTHLTTTLTVEMLVKVLHDLYGRFDLAAYRYKVQRIKFLGDCYY 351

  Fly   328 CVSGLPEPRKDHAKCAVEMGLDMIDAIATVVEATDVILNMRVGIHTGRVLCGVLGLRKWQFDVWS 392
            ||:||.:|..|||...|.:||.||:.|..|.:...:.:|||:|:|:|.:..||:|..|.|||:|.
  Fly   352 CVAGLSDPDPDHANNCVILGLSMINHIMEVRDIHGLDINMRIGVHSGNLFAGVIGEAKLQFDIWG 416

  Fly   393 NDVTLANHMESGGEPGRVHVTRATLDSLS-GEYEVEAGHGDERS-SYLRDHGVDTFFIVPPPHRR 455
            .|||:||.:||.|.||.||::.|||::|. ..:::|.|..:.|. ..|:.:.:.::.|      |
  Fly   417 LDVTIANVLESTGVPGCVHISGATLNNLDVNRFDIEDGPEEARDHPLLKKYRIRSYII------R 475

  Fly   456 KPLMLNTLGVRSAIGSRRKLSFRN------VSNVVMQLLHTIKFSEPV--PFSNIATGSFPSAAS 512
            :.|.::.......:|....:|..|      :|:...|.|..: |.|.:  .|..:...:| |...
  Fly   476 QDLHMDDEDSDEFLGDLHSISLCNMGAQPRISDSANQSLRAL-FHEELREEFRKMPVSAF-SPKR 538

  Fly   513 ALGGGVSVGGGGGGGGGGVARGSTCEANSGNVQVSEKGSRKVIRLQKILHATPPPHGMGYGSVVG 577
            .||                    .|..|:|.                                  
  Fly   539 LLG--------------------ICRFNTGK---------------------------------- 549

  Fly   578 SGGGVDSGISGGGGCVSGGIAGGGGVQVTVGTNPNSTASTISRIHRHNHKNNKSQSKVADKFKRP 642
                                                                             
  Fly   550 ----------------------------------------------------------------- 549

  Fly   643 FRKRHSVAAHHQPTNRVNRFLSQAINARSVDCDKSEHVDRLTLRFRQSDMEREYHKDFDLGF--- 704
                 .|.||            |.:|              :.|.|....:||.|.|..|..:   
  Fly   550 -----EVPAH------------QNLN--------------ICLTFTDPILERAYLKQTDYMYKYS 583

  Fly   705 ---TTAMGCSLLLLILGAALQVTA----LPRTLILLLLFLFAFIWVSAILMLLLAVRLKWIIW-- 760
               :.::||||:.:.|.....:.:    ||.::..:...|....|            .|...|  
  Fly   584 IILSASVGCSLVYIELMDTQMICSSCFVLPASVATIQCILALIAW------------YKKYCWTR 636

  Fly   761 ----------------------DISESFSLRMAITIFTVILIYSVGQVNVFTCVSD--------- 794
                                  .|..|..:|:.|.:|.:|..:.|..:.|.:|..:         
  Fly   637 YGRNNVPHHYNGFSCFIFRIHDKILNSLPIRICIYLFLMISSFFVMCLIVMSCQREEFEMAYIEE 701

  Fly   795 ---HPCSGNGTTSFQNDSHRKCSLP----QYVSLSAAFAFLSVSVFLRLPIIFKSLLVLGMGTIY 852
               |         ::.::| .|..|    ..:||.....|    .|..:||:.|:.:.:.....|
  Fly   702 RLFH---------YEQEAH-ICFHPWVTTNMLSLMICLTF----TFAHIPIMVKTAVAILETLAY 752

  Fly   853 GLFIELSHQNIFECYDNRVNASIPLHLISLARIAIFMIAILVHGRLVEGTARLDFLWQLQASQEK 917
            .|.|......:|. :....|............|.|..:.:.|..|.:|.|.:::|.|::...:|:
  Fly   753 LLLIFFQFDFVFH-HSVTTNPYFKSEYAHALLICITFLIMFVKERQIEFTNKVNFNWRVDLRKEE 816

  Fly   918 KEMDVLQESNKRILHNLLPAHVAAHFLDAQFRNNMELYHQSYAKVGVIFASVPNFNEFYTEMDGS 982
            ....:...|...||:|:||:|:...:|::..::  |||.::|..|.|:||.:.||     |||  
  Fly   817 NAASLTNHSIIIILNNILPSHIVDVYLNSLAKH--ELYFENYRMVSVMFAMLINF-----EMD-- 872

  Fly   983 DQGLECLRLLNEIIADFDELL---KEDRFRGIDKIKTVGSTYMAVVGLIPEY----------KIQ 1034
               |..||:||||||:||.||   ||  :..::|||.||.||||..||...:          .|.
  Fly   873 ---LRSLRVLNEIIAEFDTLLLFYKE--YYTVEKIKIVGCTYMAACGLDLNFAGSTSTNRKESIP 932

  Fly  1035 PNDPNSVRRH--------------MTALIEYVKAMRHSLQEINSHSYNNF---------MLRVGI 1076
            |.:.|..:..              :..:..|...|..:|.:.| .:|.:.         .:.:||
  Fly   933 PTEFNEEQSRRILFQQSNEDLDEVVFVMTSYALDMMRTLAKSN-EAYQSIAGDRNITDGTIAIGI 996

  Fly  1077 NIGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGYSQVTQEVVDSLVGSHFEFRC--RGTIK 1139
            :.|.|:||::||.:|.||||||.||:||||:|||:||:..||:|..:.|  ..|...|  ||...
  Fly   997 SSGEVMAGIVGASQPHYDIWGNPVNMASRMESTGLPGHIHVTEETSEIL--QQFGITCSYRGMTF 1059

  Fly  1140 VKGKGDMVTYFLCDSGNKSLNGEVRNAMSLPQSLHAPDYYMKVSQFPENRVNT------DTYSKK 1198
            |||:|.:.||         |.|...|...:||         |.::||.::..:      .||:..
  Fly  1060 VKGRGKIPTY---------LVGIDENLNFIPQ---------KATRFPSHQERSTVISLQSTYTHA 1106

  Fly  1199 ENGHLYAGNGVEEQQLL 1215
            ||.:..|.......|.|
  Fly  1107 ENNNSIASTSRHTLQSL 1123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rutNP_511156.2 AC_N <17..255 CDD:292831 48/241 (20%)
CYCc 230..425 CDD:214485 83/205 (40%)
Guanylate_cyc 266..438 CDD:278633 79/183 (43%)
DUF1053 624..696 CDD:283888 9/71 (13%)
SLC5-6-like_sbd <742..>893 CDD:294310 30/190 (16%)
CYCc 924..1134 CDD:214485 86/245 (35%)
Guanylate_cyc 954..1151 CDD:278633 86/234 (37%)
ACXENP_652601.3 AC_N <31..272 CDD:318454 50/244 (20%)
Nucleotidyl_cyc_III 290..459 CDD:325147 77/168 (46%)
Nucleotidyl_cyc_III 851..1071 CDD:325147 86/243 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D57794at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45627
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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