DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rut and ACXC

DIOPT Version :9

Sequence 1:NP_511156.2 Gene:rut / 32406 FlyBaseID:FBgn0003301 Length:2248 Species:Drosophila melanogaster
Sequence 2:NP_609593.1 Gene:ACXC / 34689 FlyBaseID:FBgn0040508 Length:1130 Species:Drosophila melanogaster


Alignment Length:1313 Identity:320/1313 - (24%)
Similarity:533/1313 - (40%) Gaps:328/1313 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DHAVKATRGRPLNTLRFENDELECLYQRYTLKLQRFSVLGVVALVFVLCGVMAALSLTFNNAATF 66
            :|:....:.:.||        ||..|:.|.::|. .|.|.:..::|::. .|:.|::.......:
  Fly    32 EHSYLREKCKELN--------LEEEYRYYQVRLM-VSNLTIFYVLFIIL-AMSFLTIELLYVQHY 86

  Fly    67 HNIFNAIVCGLFAVVLVLLQCSV------IKDHHLPTLCYGI----LLFTASICVVSMPTLGSVF 121
            :.:|...|..:.:.:|||...|:      :..|....:...:    |:....|.::|.....:.:
  Fly    87 NAVFFNFVIRVVSTILVLTVLSINFCEKFVSRHRWVMIASSVLSVYLVVLTDIVMISYHFYKNDW 151

  Fly   122 PVDTKEVMAEGVWQIVFVVFLAYAMMPL-QIWEAVAFGIALPSVHI-----SLTVYKIFTDALRY 180
            |::|.        ..||.:.:.|..:|: .|..|.....::..:::     |||...::||...:
  Fly   152 PLNTS--------FDVFTLCMIYMFLPIPSIKGAALLASSVSLIYVAFFMHSLTFNAVYTDRDSF 208

  Fly   181 LEYNQLIANIVIFIGVNVAGLVVNIMMERAQRRTFLDTRNCIASRLEIQDENEKLERLLLSVLPQ 245
             .|:.:..:|:..:|.|:.|:...||.:...|.:|||....|.....::....:...||.|:||.
  Fly   209 -GYDVISTDILHNLGFNMMGIFFRIMNDTMVRASFLDRHQFIMEETWLRHALLQESILLDSILPP 272

  Fly   246 HVAMQMKNDILSPVA------GQFHR--------IYIQKHENVSILFADIVGFTVLSSQCSAQEL 296
            .:|..::..|.|.:.      .:|..        :.||.|.:||||:||:|.:|.|::..:...|
  Fly   273 QIAKPVQEKIKSKITQSENSPDRFQMGPRTTESFMAIQIHPDVSILYADVVNYTHLTTTLTVGNL 337

  Fly   297 VRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGLPEPRKDHAKCAVEMGLDMIDAIATVVEAT 361
            |::|::|:||||..|.:....|||.||||||||:||..|..|||||.|.:|:.||..|..|....
  Fly   338 VKVLHDLYGRFDIAASNFKVQRIKFLGDCYYCVAGLTTPDPDHAKCCVSLGISMISNIQEVRAER 402

  Fly   362 DVILNMRVGIHTGRVLCGVLGLRKWQFDVWSNDVTLANHMESGGEPGRVHVTRATLDSLS-GEYE 425
            .:.::||:|:|:|.:|.|::|..|.|||:|..||.:|||:||.||||.|||:..||..|: .:|.
  Fly   403 GLDIDMRIGVHSGSLLAGIIGEAKLQFDIWGTDVEIANHLESTGEPGYVHVSGRTLSMLNPADYT 467

  Fly   426 VEAGHGDERSSYLRDHGVDTFFIVPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVVMQLLHT 490
            :.:|                                              :.:..|:.|:|.:||
  Fly   468 ILSG----------------------------------------------TQKAQSDPVLQYIHT 486

  Fly   491 IKFSEPVPFSNIATGSFPSAASALGGGVSVGGGGGGGGGGVARGSTCEANSGNVQVSEKGSRKVI 555
            ...:     ..:|..||.::.                 |||...|..|..|              
  Fly   487 YLLT-----GQVARESFITSI-----------------GGVRSSSVLEVKS-------------- 515

  Fly   556 RLQKILHATPPPHGMGYGSVVGSGGGVDSGISGGGGCVSGGIAGGGGVQVTVGTNPNSTASTISR 620
                                                                          |.|
  Fly   516 --------------------------------------------------------------IDR 518

  Fly   621 IHRHNHKNNKSQSKVADKFKRPFRKRHSVAAHHQPTNRVNRFLSQAINARSVDCDK--SEHVDRL 683
            |    ..:..|||.:.|:|:..||        :.|...:| ..|.......:|..|  ...:...
  Fly   519 I----RSSRPSQSSMTDEFREEFR--------NMPVGGIN-LNSPCCRRTRLDTHKKTQREIGIF 570

  Fly   684 TLRFRQSDMEREYHKDFDLGFTTAM------GCSLLLL-ILGAALQVTALPRTLILLLLFLFAFI 741
            ...|:.|.:|..|....|..|.::|      ||.|:.: |:......||      .:::.|..|.
  Fly   571 CAAFKDSSLEWNYLHQPDFIFKSSMLLAWGIGCCLIYIQIVTNNFSCTA------CIVVDLVTFF 629

  Fly   742 WVSAILMLLLAVRLKW--------------------IIWDISESFSLRMAITIFTVILIYSVGQV 786
            :::::|.|.....:.|                    |...|..|.|||:.:.:..:...|:|..:
  Fly   630 FLTSLLCLAWYKNVCWWKSGRYEFRIYGKYSCMAFHIFEKIQHSVSLRITVYLGILFSYYAVISL 694

  Fly   787 NVFTCVSD-HPCSGNGTTSFQNDSHRKCSLPQYVSLSAAFAFLSVS-VFLRLPIIFKSLLVLGMG 849
            .:..|..| :..|...:..:..:..|......:|..:.....|.:| .|.|:|...|.::.....
  Fly   695 IMLNCDRDMYELSYIESKIYHYEMDRDTCFHPWVFTNMISLILGISYTFARIPFGLKIVISCCET 759

  Fly   850 TIYGLFIELSHQNIFECYDNRVNASIPLHLISLARIAIFMIAILVHGRLVEGTARLDFLWQLQAS 914
            ..|.|.:......||: :.......:...|....|:.:.::.:....|..|...::::...:...
  Fly   760 LAYLLIVFFQFAFIFQ-HSATTTPFMKAELAHCLRVCMMLLTMYAKERQSEFNTKMNYKLNVDLQ 823

  Fly   915 QEKKEMDVLQESNKRILHNLLPAHVAAHFLDAQFRNNMELYHQSYAKVGVIFASVPNFNEFYTEM 979
            .::|..|:..:|...:|:|:||:||...:|::..::  |||:::|..|.|:||.:.||       
  Fly   824 NKQKAADLTNQSIIILLNNILPSHVVDLYLNSLAKH--ELYYENYRMVSVMFAMLINF------- 879

  Fly   980 DGSDQGLECLRLLNEIIADFDELLKEDR-FRGIDKIKTVGSTYMAVVGLIPEYKIQPNDPNSVR- 1042
               ...|..||:||:||..||.||...| :..::|||.||.||||..||  ::.:..|    :| 
  Fly   880 ---PMNLPSLRVLNDIITQFDRLLTAYREYYVVEKIKVVGCTYMAACGL--DFNLASN----IRQ 935

  Fly  1043 ----RHMTALIEYVKAMRHSLQEINSHS-YNN----------------------------FMLR- 1073
                |:.:..:|...|..|.:.:.|..| .||                            |..| 
  Fly   936 TDHFRNSSLHVEVEHARNHRMTDENYDSDMNNDEVVFIMTTFALDLMRTLAACNRAYSSSFFERS 1000

  Fly  1074 -------VGINIGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGYSQVTQEVVDSLVGSHFE 1131
                   :||:.|.::|||:||.:|.||||||.||:||||:|||:||:.|||:|....|  ..|:
  Fly  1001 LSQGKICIGISSGEIMAGVVGASQPHYDIWGNPVNMASRMESTGLPGHIQVTEESAKIL--QEFD 1063

  Fly  1132 FRC--RGTIKVKGKGDMVTYFLCDSGN------KSLNGEVRNAMSLPQSLHAPDYYMKVSQFPEN 1188
            .:|  ||...|||:||:.|||:....|      |.:|..:....|:..||. ||...|.|.    
  Fly  1064 IKCIYRGMTFVKGRGDIPTYFVGIDENLKFMSAKLVNRSLSRRFSVMSSLD-PDSLRKSSS---- 1123

  Fly  1189 RVNTDTYSKKENG 1201
                   |.:|:|
  Fly  1124 -------SDQESG 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rutNP_511156.2 AC_N <17..255 CDD:292831 51/253 (20%)
CYCc 230..425 CDD:214485 85/209 (41%)
Guanylate_cyc 266..438 CDD:278633 78/172 (45%)
DUF1053 624..696 CDD:283888 15/73 (21%)
SLC5-6-like_sbd <742..>893 CDD:294310 28/172 (16%)
CYCc 924..1134 CDD:214485 85/252 (34%)
Guanylate_cyc 954..1151 CDD:278633 86/241 (36%)
ACXCNP_609593.1 AC_N <33..285 CDD:292831 55/270 (20%)
CYCc 293..468 CDD:214485 78/174 (45%)
Nucleotidyl_cyc_III 307..466 CDD:299850 76/158 (48%)
CYCc 833..1060 CDD:214485 84/246 (34%)
Nucleotidyl_cyc_III 861..1085 CDD:299850 86/241 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D8294at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45627
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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