DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rut and gcy-19

DIOPT Version :9

Sequence 1:NP_511156.2 Gene:rut / 32406 FlyBaseID:FBgn0003301 Length:2248 Species:Drosophila melanogaster
Sequence 2:NP_001348702.1 Gene:gcy-19 / 191650 WormBaseID:WBGene00001544 Length:1187 Species:Caenorhabditis elegans


Alignment Length:464 Identity:108/464 - (23%)
Similarity:193/464 - (41%) Gaps:101/464 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 VMAEGVWQIVFVVF----LAYAMMPL---QIWEA--VAFGIALP-SVHISLTVYKIFT------- 175
            |:....||.....|    ||....|:   |:|.|  |..|..|| .:..|..:|.:..       
 Worm   705 VLVNESWQAKLTDFGLGTLAEEKKPMKRRQLWMAPEVIRGTLLPHQIEKSADIYSLAVIASEVLT 769

  Fly   176 --DALRYLEYNQLIANIVIFI---------------GVNV---------------------AGLV 202
              :|....|....:..||..|               ||.:                     |.::
 Worm   770 RKEAWNMAERKDTVDEIVYRIKKGGPNAPRPELDMDGVEINHNLLILIRDCWSEEPADRPSADVI 834

  Fly   203 VNIMMERAQRR-TFLD---------TRNCIASRLEIQD-------ENEKLERLLLSVLPQHVAMQ 250
            .|::.....:: ..:|         |.|.   .:|::|       |.:|.:.||..:||:.||.:
 Worm   835 CNLLKNMMPKKGNLMDHVFNILEDYTTNL---EVEVEDRTKELTAEKKKADVLLGRMLPKQVAER 896

  Fly   251 MKNDILSPVAGQFHRIYIQKHENVSILFADIVGFTVLSSQCSAQELVRLLNELFGRFDQLAHDNH 315
            :|         |...:..:..::|::.|:|:|.||.|:::||..::|.|||:|:..||.:..::.
 Worm   897 LK---------QGQTVEPEGFDSVTVFFSDVVKFTQLAAKCSPFQVVNLLNDLYSNFDAIIEEHG 952

  Fly   316 CLRIKILGDCYYCVSGLPEPRKD-HAKCAVEMGLDMIDAIAT--VVEATDVILNMRVGIHTGRVL 377
            |.:::.:||.|.||||||....: |.|..||:.||.:....:  :.......:.:|:|:::|..:
 Worm   953 CYKVESIGDGYLCVSGLPSKNGNAHIKQIVELSLDFMSYCKSFKIPHLPREKVELRIGVNSGPCV 1017

  Fly   378 CGVLGLRKWQFDVWSNDVTLANHMESGGEPGRVHVTRATLDSLSGEYEVEAGHGDERSSYLRDHG 442
            .||:||...::.::.:.|..|:.|||.|:...:|::.|:...|...|..:..........::..|
 Worm  1018 AGVVGLSMPRYCLFGDTVNTASRMESNGKASHIHLSAASYTLLMKHYPNQYNTASRGDVIIKGKG 1082

  Fly   443 V-DTFFIVPPPHRRKPLMLNTLGVRSAIGSRR-KLSFRNVSN-----VVMQLLHTIKFSEPVPFS 500
            | :||::.   .|....|    ||.|..|.:. |.:..|.|:     .....:|.:|.:.||...
 Worm  1083 VMETFWVF---ERNNQFM----GVSSNSGYQSDKKATNNGSSPESTPPSTPPMHEVKANSPVRHR 1140

  Fly   501 NIATGSFPS 509
            ...:.|.|:
 Worm  1141 KPPSPSSPT 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rutNP_511156.2 AC_N <17..255 CDD:292831 39/198 (20%)
CYCc 230..425 CDD:214485 59/204 (29%)
Guanylate_cyc 266..438 CDD:278633 49/174 (28%)
DUF1053 624..696 CDD:283888
SLC5-6-like_sbd <742..>893 CDD:294310
CYCc 924..1134 CDD:214485
Guanylate_cyc 954..1151 CDD:278633
gcy-19NP_001348702.1 PBP1_NPR_GC_like 45..467 CDD:107347
PKc_like 571..841 CDD:328722 25/135 (19%)
CYCc 876..1065 CDD:214485 58/197 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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