DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rut and gcy-14

DIOPT Version :9

Sequence 1:NP_511156.2 Gene:rut / 32406 FlyBaseID:FBgn0003301 Length:2248 Species:Drosophila melanogaster
Sequence 2:NP_506660.2 Gene:gcy-14 / 191647 WormBaseID:WBGene00001540 Length:1111 Species:Caenorhabditis elegans


Alignment Length:555 Identity:129/555 - (23%)
Similarity:225/555 - (40%) Gaps:143/555 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FENDELE-----CLYQRYTLKLQRFSVLGVVALVFVLCGVMAALSLTFNNAATFHNIFNAIVCGL 77
            |:||.|.     ||.......|.||...|      .|..|::..|:..::...| ::...|..| 
 Worm   592 FDNDNLNKFIGLCLDGPQLFSLWRFCSRG------SLSDVISKSSMQMDSFFMF-SLIRDISNG- 648

  Fly    78 FAVVLVLLQCSVIKDH-HLPTLC-------------YGI-------------LLFTA-------- 107
                |:.:..|.:|.| ||.:.|             ||:             ||:|.        
 Worm   649 ----LLFIHNSFLKCHGHLTSRCCLIDDRWQIKISGYGLKSVRTFENPKKEDLLWTPPENLRNEN 709

  Fly   108 ------------SICVVSMPTLGSVFPVDTKEVMAEGVWQIVFVVFLA--YAMMP-LQIWEAVAF 157
                        .|....:.|..|.|.::.::...:   .|::.|...  ..|.| |...|.|..
 Worm   710 EERLPEGDIYSFGIICSEILTRSSAFDLENRKEKPD---VIIYQVKKGGHNPMRPSLDTGETVEI 771

  Fly   158 GIAL-----------PSVHISLTVYKIFTDALRYLEYNQLIANIVIFIGVNVAGLVVNIMMERAQ 211
            ..||           ||...|:...:...:.:|....:.|:.::     .|:.....:.:.|...
 Worm   772 NPALLHLIRDCWTERPSERPSIEQVRGHLNGMRDGRKSNLMDHV-----FNMLETYASTLEEEVS 831

  Fly   212 RRTFLDTRNCIASRLEIQDENEKLERLLLSVLPQHVAMQMKNDILSPVAGQFHRIYIQKHENVSI 276
            .||           .|:.:|.:|.:.||..:||:.||.::|       .||  .:..:..|.|:|
 Worm   832 DRT-----------KELVEEKKKSDVLLYRMLPKMVADKLK-------LGQ--TVEPETFEQVTI 876

  Fly   277 LFADIVGFTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGLPEPR-KDHA 340
            .|:|:|.||.|:.:|:..::|.|||:|:..||.:...|...:::.:||.|.||||||... .:|.
 Worm   877 FFSDVVQFTTLAGKCTPLQVVTLLNDLYTIFDGIIEQNDVYKVETIGDGYLCVSGLPHRNGNEHI 941

  Fly   341 KCAVEMGLDMIDAIA--TVVEATDVILNMRVGIHTGRVLCGVLGLRKWQFDVWSNDVTLANHMES 403
            :....|.|..:.::.  .|.......:|:|:||:.|.|:.||:||...::.::.:.|..|:.|||
 Worm   942 RHIARMSLGFLSSLEFFRVQHLPSERINLRIGINCGSVVAGVVGLTMPRYCLFGDAVNTASRMES 1006

  Fly   404 GGEPGRVHVT---RATLDSLSGEYEVEAGHGDERSSYLRDHGV-DTFFIVPPPHRRKPLMLNTLG 464
            .|:||::|||   ...|..:.|.:..|: .|:   ..::..|| :|:::              ||
 Worm  1007 NGKPGKIHVTAEANQMLTQVVGGFRTES-RGE---VIIKGKGVMETYWL--------------LG 1053

  Fly   465 VRSAIG------------SRRKLSFRNVSNVVMQL 487
            .:|.|.            ..|:.|.|::|.::.::
 Worm  1054 EQSRISVSAQAPREKTPEPPRRQSVRSISPIIEKM 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rutNP_511156.2 AC_N <17..255 CDD:292831 60/302 (20%)
CYCc 230..425 CDD:214485 65/200 (33%)
Guanylate_cyc 266..438 CDD:278633 56/177 (32%)
DUF1053 624..696 CDD:283888
SLC5-6-like_sbd <742..>893 CDD:294310
CYCc 924..1134 CDD:214485
Guanylate_cyc 954..1151 CDD:278633
gcy-14NP_506660.2 PBP1_NPR_GC_like 21..423 CDD:107347
ANF_receptor 43..418 CDD:279440
PKc_like 535..800 CDD:304357 44/222 (20%)
HNOBA <817..860 CDD:285003 13/53 (25%)
CYCc 839..1031 CDD:214485 65/200 (33%)
Guanylate_cyc 866..1053 CDD:278633 59/204 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.