DRSC/TRiP Functional Genomics Resources

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Protein Alignment rut and gc2

DIOPT Version :9

Sequence 1:NP_511156.2 Gene:rut / 32406 FlyBaseID:FBgn0003301 Length:2248 Species:Drosophila melanogaster
Sequence 2:XP_021333059.1 Gene:gc2 / 140425 ZFINID:ZDB-GENE-011128-8 Length:1120 Species:Danio rerio


Alignment Length:275 Identity:86/275 - (31%)
Similarity:146/275 - (53%) Gaps:28/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 EIQDENEKLERLLLSVLPQHVAMQMK-NDILSPVAGQFHRIYIQKHENVSILFADIVGFTVLSSQ 290
            |::.|.:|.|:||..:||..||..:| ...:.|          :..|:||:.|:||||||.:|:.
Zfish   845 ELEIEKQKTEKLLTQMLPPSVAEALKLGTTVEP----------EHFESVSLYFSDIVGFTTISAN 899

  Fly   291 CSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGLPEPRKD-HAKCAVEMGLDMIDAI 354
            ....|:|.|||:|:..||.:..::...:::.:||.|...||:|.|..: ||.....|.||::.|:
Zfish   900 SEPIEVVDLLNDLYTTFDAVIGNHDVYKVETIGDAYMVASGVPVPNGNRHAAEIANMALDILSAV 964

  Fly   355 AT--VVEATDVILNMRVGIHTGRVLCGVLGLRKWQFDVWSNDVTLANHMESGGEPGRVHVTRATL 417
            .|  :....||.:.:|:|:|||..:.||:||...::.::.:.||.|:.|||.|.|.|:||..:|:
Zfish   965 GTFRMRHMPDVPVRIRIGLHTGPCVAGVVGLTMPRYCLFGDTVTTASRMESTGLPYRIHVHSSTV 1029

  Fly   418 DSLSGEYEVEAGHGDE---RSSYLRDHGVDTFFIVPPPHRRKPLMLNTLGVRSAIGSR-----RK 474
            ..|   .|::.|:..|   |:........:|:::.......|||.:..: ::|.:.|:     .|
Zfish  1030 KIL---MELKLGYRVELRARTELKGKRIEETYWLTGRDGFTKPLPVPPV-LKSGLESKDFKVMLK 1090

  Fly   475 LSFRNVSNV--VMQL 487
            .:.|.:|.|  |.||
Zfish  1091 KAVRKISTVRQVAQL 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rutNP_511156.2 AC_N <17..255 CDD:292831 11/28 (39%)
CYCc 230..425 CDD:214485 68/198 (34%)
Guanylate_cyc 266..438 CDD:278633 61/177 (34%)
DUF1053 624..696 CDD:283888
SLC5-6-like_sbd <742..>893 CDD:294310
CYCc 924..1134 CDD:214485
Guanylate_cyc 954..1151 CDD:278633
gc2XP_021333059.1 PBP1_sensory_GC_DEF_like 59..440 CDD:107366
PK_GC-2D 551..815 CDD:270945
HNOBA <824..869 CDD:311573 10/23 (43%)
CYCc 848..1040 CDD:214485 70/204 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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