DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and AT5G58787

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_568885.1 Gene:AT5G58787 / 835995 AraportID:AT5G58787 Length:242 Species:Arabidopsis thaliana


Alignment Length:197 Identity:49/197 - (24%)
Similarity:67/197 - (34%) Gaps:72/197 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MTWANAPEFVPRY--KANSADFQAT---------EGVQDICPYGGSCIWGSKCSYPLHMEICKMC 118
            ||:|:....:..|  ||:..:|||.         .||.||.        .||     ..|:||| 
plant    73 MTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDID--------DSK-----QKEVCKM- 123

  Fly   119 DLYCLHPMDQNQRRAHNRECLEQHEQAMELSFAIARSKDKMCGICFDTVVEKKGRERRFGILSKC 183
                         |...::..|..|..:|        :::.||||.:  :..|      .:|..|
plant   124 -------------RYRKKDESEMSEIEIE--------REEECGICME--MNSK------VVLPNC 159

  Fly   184 KHIFCLTCIRTWRQAHQFEATVTRGCPECRVFSEFVCPSAYWV-----DT------KEEKDKLLS 237
            .|..|:.|.|.||...|       .||.||...:.|.....|:     ||      ..|..|.|.
plant   160 THSLCIKCYRDWRGRSQ-------SCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLF 217

  Fly   238 EY 239
            .|
plant   218 MY 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632
PHA03096 <80..239 CDD:222981 42/178 (24%)
RING 159..213 CDD:238093 16/53 (30%)
AT5G58787NP_568885.1 RING_Ubox 144..182 CDD:418438 16/52 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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