DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5347 and Mkrn1

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_061280.2 Gene:Mkrn1 / 54484 MGIID:1859353 Length:481 Species:Mus musculus


Alignment Length:353 Identity:132/353 - (37%)
Similarity:174/353 - (49%) Gaps:76/353 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QTICRFHLLGICRFGDLCRFSHD---------------------ETTPNDNQSP--QISEIADEV 48
            |..||:.:.|:|:.||.||:|||                     :....::..|  |....|.::
Mouse    58 QVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVTATDL 122

  Fly    49 VENEQVVASTS---------------SYSRQMT----------WANAPEFVP--RYKANSA---- 82
            .....:.||:|               :.||..:          |.||.||||  .|...:|    
Mouse   123 SAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVPGQPYCGRTAPSCT 187

  Fly    83 ---------------DFQATEGVQDICPYG--GSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQ 130
                           :....|..:.:|||.  |.|.:|..|.| ||.:.|.||.|..|||:|..|
Mouse   188 EVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVY-LHGDSCDMCGLQVLHPVDAAQ 251

  Fly   131 RRAHNRECLEQHEQAMELSFAIARSKDKMCGICFDTVVEKKG-RERRFGILSKCKHIFCLTCIRT 194
            |..|.:.|:|.||:.||||||:.||||.:||||.:.|.||.. .||||||||.|.|.:||.|||.
Mouse   252 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRK 316

  Fly   195 WRQAHQFEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCP 259
            ||.|.|||:.:.:.|||||:.|.||.||..||:.||||.||:.:|:.||..|.|:||:.|.|.||
Mouse   317 WRSAKQFESKIIKSCPECRITSNFVIPSENWVEEKEEKQKLIQKYKEAMSNKACRYFDEGRGSCP 381

  Fly   260 FGNKCFYRH---HRRCDDNQTQSNAVNS 284
            ||..|||:|   ..|.::.|.|....:|
Mouse   382 FGGNCFYKHAYPDGRREEPQRQKVGTSS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632 12/43 (28%)
PHA03096 <80..239 CDD:222981 83/180 (46%)
RING 159..213 CDD:238093 31/54 (57%)
Mkrn1NP_061280.2 zf-CCCH_4 59..80 CDD:375512 9/20 (45%)
zf_CCCH_4 90..108 CDD:375772 0/17 (0%)
PHA03096 <221..370 CDD:222981 81/149 (54%)
Makorin-type Cys-His 236..263 13/26 (50%)
RING-HC_MKRN1_3 278..338 CDD:319644 34/59 (58%)
RING-HC finger (C3HC4-type) 281..334 CDD:319644 30/52 (58%)
MKRN1_C 400..479 CDD:374139 3/10 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I8159
eggNOG 1 0.900 - - E1_KOG1039
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32175
Inparanoid 1 1.050 254 1.000 Inparanoid score I3177
Isobase 1 0.950 - 0 Normalized mean entropy S3270
OMA 1 1.010 - - QHG58455
OrthoDB 1 1.010 - - D1388677at2759
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 1 1.000 - - mtm8837
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2178
SonicParanoid 1 1.000 - - X837
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.920

Return to query results.
Submit another query.