DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and mkrn2

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_001005447.1 Gene:mkrn2 / 448038 XenbaseID:XB-GENE-5879487 Length:418 Species:Xenopus tropicalis


Alignment Length:320 Identity:113/320 - (35%)
Similarity:158/320 - (49%) Gaps:61/320 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RSQTICRFHLLGICRFGDLCRFSHD-------------------ETT----PNDNQSPQISEIAD 46
            :..|:|||:..|.|.:|..||:.|.                   |:|    |....:..:::.|.
 Frog    32 KPSTVCRFYQRGQCAYGARCRYDHVKPCNGSVFYPPQEMAPAPLESTPPLLPTQEAAAPVTKSAP 96

  Fly    47 EVVENEQVVASTSSYSRQMTWANA------PEFVPRYKANS--ADFQA----------------- 86
            :..|.:.||..    .|.:..|:.      |...|...|:.  ::.:|                 
 Frog    97 QRREKKSVVLR----DRDLCGASVEKAHPDPALRPGCAADPPVSELEAKPHSYLEAICTGLDETP 157

  Fly    87 -----TEGVQDICPY--GGSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQ 144
                 .:..|.:||:  .|.|.:|..|.| :|..:|::|.|..|||.||.||..|.:.|:...|:
 Frog   158 IPSAYPDAPQQLCPFAQAGGCHYGESCPY-IHGNVCEICGLQVLHPYDQEQRGHHEKLCMANFER 221

  Fly   145 AMELSFAIARSKDKMCGICFDTVVEKKG-RERRFGILSKCKHIFCLTCIRTWRQAHQFEATVTRG 208
            .||.:||...|:.|:|.||.:.|.:|:. .||||||||.|.|.:||.|||.||.|.|||..|.:.
 Frog   222 DMERAFAFQASEGKVCSICMERVYDKQSPSERRFGILSNCHHTYCLACIRQWRCARQFENPVIKS 286

  Fly   209 CPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGNKCFYRH 268
            ||||||.||||.||||||:.:.:|.:|:..::..||.|.||||:.|.|.||||.||.|.|
 Frog   287 CPECRVISEFVIPSAYWVEDQSKKFELIEAFKQGMGKKACKYFDQGRGTCPFGGKCLYLH 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632 10/43 (23%)
PHA03096 <80..239 CDD:222981 74/185 (40%)
RING 159..213 CDD:238093 30/54 (56%)
mkrn2NP_001005447.1 YTH1 <5..>80 CDD:227416 12/47 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..100 4/23 (17%)
PHA03096 <178..310 CDD:222981 67/132 (51%)
Makorin-type Cys-His. /evidence=ECO:0000255 192..221 12/28 (43%)
RING-HC_MKRN2 234..291 CDD:319645 31/56 (55%)
RING-HC finger (C3HC4-type) 237..290 CDD:319645 29/52 (56%)
MKRN1_C 360..>412 CDD:374139
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I8364
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 251 1.000 Inparanoid score I3142
OMA 1 1.010 - - QHG58455
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 1 1.000 - - mtm9499
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2178
SonicParanoid 1 1.000 - - X837
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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