Protein Alignment CG5347 and Mkrn2

DIOPT Version :10

• Sequence 1: NP_572970.1
• Gene: CG5347 / 32403
• FlyBaseID: FBgn0030578
• Length: 285
• Species: Drosophila melanogaster
• Sequence 2: NP_001008315.1
• Gene: Mkrn2 / 297525
• RGDID: 1310618
• Length: 417
• Species: Rattus norvegicus
• Alignment Length: 322
• Identity: 119/322 - (36%)
• Similarity: 164/322 - (50%)
• Gaps: 63/322 - (19%)

  Fly     5 RSQTICRFHLLGICRFGDLCRFSHDE--------TTPNDNQSPQ--------ISEIADEVV---- 49
            :..|||:::..|.|.:|..||:.|.:        ..|..:.||.        .|:||..|:
  Rat    32 KPSTICKYYQKGYCAYGARCRYDHTKPPAAAGGAVGPAPHPSPSSGLHSPHPSSDIATSVMRTHS 96

  Fly    50 ------ENEQVVASTSSYSRQMT-----------------WANAPEFVPRYKANS---------A 82
                  |.:.:|..    .|.:|                 ..|.|:..|..|.:|         .
  Rat    97 NEPRKREKKTLVLR----DRNLTGLAEDKTPPPSTVNNPGGCNDPQTSPEMKPHSYLDAIRTGLD 157

  Fly    83 DFQATEGV---QDICPY--GGSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQH 142
            |.:|:...   |.:|||  .|.|.:|..|.| ||.::|::|.|..|||.|..||:||.:.|:...
  Rat   158 DLEASSSYSNEQQLCPYAAAGECRFGDACVY-LHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTF 221

  Fly   143 EQAMELSFAIARSKDKMCGICFDTVVEK-KGRERRFGILSKCKHIFCLTCIRTWRQAHQFEATVT 206
            |..||.:||...|:||:|.||.:.::|| ...||||||||.|.|.:||:|||.||.|.|||..:.
  Rat   222 EHEMEKAFAFQASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFENPII 286

  Fly   207 RGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGNKCFYRH 268
            :.||||||.||||.||.|||:.:.:|::|:..::..||.|.||||..|.|.||||:||.|||
  Rat   287 KSCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRH 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5347	NP_572970.1	zf-CCCH_4	8..29	CDD:465626	8/20 (40%)
		PHA03096	<80..239	CDD:222981	77/173 (45%)
		RING-HC_MKRN	158..213	CDD:438184	30/55 (55%)
Mkrn2	NP_001008315.1	zf-CCCH_3	1..>55	CDD:464787	8/22 (36%)
		zf_CCCH_4	37..55	CDD:465719	6/17 (35%)
		PHA03096	<179..328	CDD:222981	72/149 (48%)
		RING-HC_MKRN2	236..293	CDD:319645	31/56 (55%)