DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and Mkrn1

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:XP_006236363.1 Gene:Mkrn1 / 296988 RGDID:1303251 Length:481 Species:Rattus norvegicus


Alignment Length:353 Identity:135/353 - (38%)
Similarity:170/353 - (48%) Gaps:76/353 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QTICRFHLLGICRFGDLCRFSHD-----------------------------------ETTPND- 35
            |..||:.:.|:|:.||.||:|||                                   |.|..| 
  Rat    58 QVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVTATDL 122

  Fly    36 --NQSPQISEIADEVVENEQVVASTSSYSRQMT----------WANAPEFVP--RYKANSA---- 82
              ..||..|......|.:...:....:.||...          |.||.||||  .|...:|    
  Rat   123 SAKPSPAASSSLPSGVGSLAEMNPGEAESRNPNFPTVGAGSEDWVNAIEFVPGQPYCGRTAPSCT 187

  Fly    83 ---------------DFQATEGVQDICPYG--GSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQ 130
                           :....|..:.:|||.  |.|.:|..|.| ||.:.|.||.|..|||||..|
  Rat   188 EVPLQGSVTKEESEKEPTTVETEKQLCPYAAVGECRYGENCVY-LHGDSCDMCGLQVLHPMDAAQ 251

  Fly   131 RRAHNRECLEQHEQAMELSFAIARSKDKMCGICFDTVVEKKG-RERRFGILSKCKHIFCLTCIRT 194
            |..|.:.|:|.||:.||||||:.||||.:||||.:.|.||.. .||||||||.|.|.:||.|||.
  Rat   252 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRK 316

  Fly   195 WRQAHQFEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCP 259
            ||.|.|||:.:.:.|||||:.|.||.||.|||:.||||.||:.:|:.||..|.|:||:.|.|.||
  Rat   317 WRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKACRYFDEGRGSCP 381

  Fly   260 FGNKCFYRH---HRRCDDNQTQSNAVNS 284
            ||..|||:|   ..|.::.|.|....:|
  Rat   382 FGGNCFYKHAYPDGRREEPQRQKVGTSS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632 12/57 (21%)
PHA03096 <80..239 CDD:222981 85/180 (47%)
RING 159..213 CDD:238093 31/54 (57%)
Mkrn1XP_006236363.1 ZnF_C3H1 55..81 CDD:214632 11/22 (50%)
ZnF_C3H1 88..110 CDD:214632 0/21 (0%)
PHA03096 <221..370 CDD:222981 83/149 (56%)
RING 281..335 CDD:238093 31/53 (58%)
MKRN1_C 400..479 CDD:292443 3/10 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I7980
eggNOG 1 0.900 - - E1_KOG1039
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 254 1.000 Inparanoid score I3107
OMA 1 1.010 - - QHG58455
OrthoDB 1 1.010 - - D1388677at2759
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 1 1.000 - - mtm9084
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X837
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.940

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