DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5347 and cps3

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_594201.1 Gene:cps3 / 2543054 PomBaseID:SPAC3A11.02 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:75 Identity:24/75 - (32%)
Similarity:32/75 - (42%) Gaps:18/75 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 EAT-VTRGCPE------CRVFSEFVCPSAYWVDTKEEKDKLLS-EYRAAMGAKDCKYFNGGLGKC 258
            ||| :||..|:      |:.|.:..|.|.        |:.:.| :...|.....||||.  .|.|
pombe    24 EATSLTRPSPKSLQHVPCKFFRQGTCTSG--------KNCIFSHDLELATEKTICKYFQ--KGNC 78

  Fly   259 PFGNKCFYRH 268
            .||:||...|
pombe    79 KFGSKCALEH 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632
PHA03096 <80..239 CDD:222981 12/44 (27%)
RING 159..213 CDD:238093 6/17 (35%)
cps3NP_594201.1 ZnF_C3H1 37..61 CDD:214632 6/31 (19%)
ZnF_C3H1 66..90 CDD:214632 11/25 (44%)
YTH1 258..566 CDD:227416
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11224
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2178
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

Return to query results.
Submit another query.