powered by:
Protein Alignment CG5347 and SPCC1739.01
DIOPT Version :9
| Sequence 1: | NP_572970.1 |
Gene: | CG5347 / 32403 |
FlyBaseID: | FBgn0030578 |
Length: | 285 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_588409.2 |
Gene: | SPCC1739.01 / 2539315 |
PomBaseID: | SPCC1739.01 |
Length: | 547 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 108 |
Identity: | 28/108 - (25%) |
| Similarity: | 40/108 - (37%) |
Gaps: | 22/108 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SYRRSQTICRFHLLGICRFGDLCRFSH----DETTPNDNQSPQI---------SEIADEVVENEQ 53
|....:.||::.|.|.|:||..|..|| :...||...:..: |.:|.:.:...|
pombe 66 SLETERPICKYFLKGNCKFGPKCALSHALPGNTNLPNGTSTNTMASMAANGGASSVASKQMGANQ 130
Fly 54 VVASTSSYSRQMTWANAPEFVPRYKANSADFQATEGVQDICPY 96
:..|.|| .|..| |..|||:.......|.....||
pombe 131 ISPSLSS----KTMKN-----PADKANNTTATDVRGNTATSPY 164
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG5347 | NP_572970.1 |
ZnF_C3H1 |
4..30 |
CDD:214632 |
10/29 (34%) |
| PHA03096 |
<80..239 |
CDD:222981 |
4/17 (24%) |
| RING |
159..213 |
CDD:238093 |
|
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.
