DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and TRIM2

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_001362417.1 Gene:TRIM2 / 23321 HGNCID:15974 Length:802 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632
PHA03096 <80..239 CDD:222981
RING 159..213 CDD:238093
TRIM2NP_001362417.1 RAD18 33..>136 CDD:227719
RING-HC_TRIM2 47..92 CDD:319681
Bbox_SF 142..214 CDD:381767
BBC 219..345 CDD:128778
IG_FLMN 383..479 CDD:214720
NHL_TRIM2_like 529..802 CDD:271330
NHL repeat 547..586 CDD:271330
NHL repeat 594..633 CDD:271330
NHL repeat 636..672 CDD:271330
NHL repeat 680..720 CDD:271330
NHL repeat 729..769 CDD:271330
NHL repeat 772..798 CDD:271330
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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