DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and lep-2

DIOPT Version :9

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_001023510.1 Gene:lep-2 / 176918 WormBaseID:WBGene00002278 Length:413 Species:Caenorhabditis elegans


Alignment Length:302 Identity:112/302 - (37%)
Similarity:155/302 - (51%) Gaps:46/302 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVENEQVVASTSSYSRQMTW-- 67
            |::.||.|:|:|.|.:|..|||.|  |.|.:::.|..|  ..:..:|:|.:.::....|....  
 Worm    31 RNENICHFNLVGKCSYGRACRFLH--TRPRNDELPSCS--TPQTSQNQQNLQNSGQRVRPKQLPE 91

  Fly    68 ----ANAPEFVPRYK-------------ANSAD-------FQATEGVQDI--CPY---GGSC-IW 102
                |.|.|||||:|             |.|||       ||::.....:  |||   .|.| ..
 Worm    92 LKFNAQAAEFVPRWKMPQRGPVTSYAGAAASADHGESSSSFQSSHEQAQLMMCPYHQKSGDCNRQ 156

  Fly   103 GSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQAMELSFAIARSKDKMCGICFDTV 167
            ...|.: .|...|.||..:.|||.:...|:.|..||:..|...||.:|.:.:::.|.||||.:.:
 Worm   157 DMDCPF-AHGNYCDMCQQWSLHPYNAELRKKHENECVANHTTEMERAFLLQKTEQKTCGICMENI 220

  Fly   168 VEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQFE---ATVT-RGCPECRVFSEFVCPSAYWVDT 228
            .||   ..|||||:.|:|.|||.|||.||...|..   ||.| |.|||||..|::|.||.:||::
 Worm   221 FEK---NLRFGILNGCQHCFCLDCIRQWRSKDQENVELATKTVRSCPECRQHSDYVIPSLFWVES 282

  Fly   229 KEEKDKLLSEYRAAMGAKDCKYFNG--GLGKCPFGNKCFYRH 268
            .:|||.|:..|:.....|.|||::.  ..|.|||||||||:|
 Worm   283 GQEKDLLIEMYKENTKRKICKYYSNERSRGACPFGNKCFYKH 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632 12/24 (50%)
PHA03096 <80..239 CDD:222981 68/175 (39%)
RING 159..213 CDD:238093 29/57 (51%)
lep-2NP_001023510.1 zf-CCCH_3 1..>56 CDD:406158 12/26 (46%)
PHA03096 <157..302 CDD:222981 60/148 (41%)
RING-HC_MKRN 213..267 CDD:319435 29/56 (52%)
COG5252 <275..>331 CDD:227577 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159061
Domainoid 1 1.000 62 1.000 Domainoid score I6838
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32175
Inparanoid 1 1.050 193 1.000 Inparanoid score I2539
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58455
OrthoDB 1 1.010 - - D1388677at2759
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 1 1.000 - - otm14263
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2178
SonicParanoid 1 1.000 - - X837
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.040

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