Protein Alignment CG5334 and AT5G18550

DIOPT Version :10

• Sequence 1: NP_572969.1
• Gene: CG5334 / 32402
• FlyBaseID: FBgn0030577
• Length: 210
• Species: Drosophila melanogaster
• Sequence 2: NP_197356.2
• Gene: AT5G18550 / 831973
• AraportID: AT5G18550
• Length: 465
• Species: Arabidopsis thaliana
• Alignment Length: 481
• Identity: 88/481 - (18%)
• Similarity: 166/481 - (34%)
• Gaps: 157/481 - (32%)

  Fly   242 DVVFMPS-SVARDGGALDCSACN-SPQRVSPNCAPITIPRNDPY-FNTPCMRLTRALNGQE---- 299
            |.:.:|. .|.|:.|....:.|. :|   ||.....|:....|. .|...::|...|..|:
plant   107 DAMHIPHIFVQRNSGGSPRTVCQFNP---SPEGEEYTLAARPPVRLNDVMLKLVTELRWQKFIVF 168

  Fly   300 ---NFGVRSQIGQNSHFLDLSPVYGSADCEAETV-RSFQEGKMLTFDDLGYTLPPQNANDSNCQS 360
               ::.:|...|    |||.:...| .|...:.| |:...    .|..|..::..:..|
plant   169 YDSDYDIRGLQG----FLDQASRLG-LDVSLQKVDRNISR----VFATLFTSMKTEELN------ 218

  Fly   361 SAPFHCFTCGDFRNSLHPALI-------------PVHTILIKEHNR---LAEQVRVARPRFNDEQ 409
                      .:|::|..|::             .|.|.|..:.:.   :.|::       ||.:
plant   219 ----------RYRDTLRRAILLLSPRGAQSFISEAVETNLASKDSHWVYVNEEI-------NDAE 266

  Fly   410 IFQLVRKIMIGMWQHIVYNEYIPKYLPRRTIRNFALRPLRNGVHRGYSTSVDPSISAEFAGAAFR 474
            |.:||..   .:.:..|..:..|      ::::..:|.:||. ||..|...||           :
plant   267 IVELVHS---ALGRITVIRQIFP------SLKDNNIRCVRNN-HRIASLPCDP-----------Q 310

  Fly   475 FGHSQSRFDFPRLTENGRPAGNYDLGNDIFYADQMYLTRIGGWEPVM---NGMVRMPAMKSDRYF 536
            .|:.|                       :.....:||     ::.|:   |...|  .::..::.
plant   311 EGYLQ-----------------------MLQVSNLYL-----YDSVLMLANAFHR--KLEDRKWH 345

  Fly   537 SFGIRNQMFEIRGRNGSGVDLVSINIQRGRDMGLFPYIQYRQLVGLPTVTSFNELNTTFSQ---E 598
            |....|.|.:.......|..::. .|::||..||...:::::....|.| .|..|.|::|:   :
plant   346 SMASLNCMRKSTKPWNGGRSMLD-TIKKGRITGLTGIMEFKEAGANPHV-QFEILGTSYSETFGK 408

  Fly   599 NIQAL---------------RNVYSDPADIDLYVGIMLEEPLSGGQLGPTASFMIGEQFRALKRG 648
            :::.|               :.:.:|...:.|.|..:||||.          .|:.|..  |.:.
plant   409 DVRRLATWDSMKGFNGSLQEKPLNNDLQGLTLKVVTVLEEPF----------VMVAENI--LGQP 461

  Fly   649 DRFFYESIAEGTDNFTQEEISELRNK 674
            .|:         ..|:.|.:.||.|:
plant   462 KRY---------KGFSIEILDELSNR 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5334	NP_572969.1	RING-HC_MKRN	81..136	CDD:438184
AT5G18550	NP_197356.2	zf-CCCH	52..78	CDD:459885
		zf-CCCH	99..124	CDD:459885	5/16 (31%)
		zf-CCCH	146..172	CDD:459885	5/25 (20%)
		zf-CCCH	301..327	CDD:459885	8/64 (13%)
		zf-CCCH	346..370	CDD:459885	4/24 (17%)