DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5334 and SPOM_SPCC1739.01

DIOPT Version :10

Sequence 1:NP_572969.1 Gene:CG5334 / 32402 FlyBaseID:FBgn0030577 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_588409.2 Gene:SPOM_SPCC1739.01 / 2539315 PomBaseID:SPCC1739.01 Length:547 Species:Schizosaccharomyces pombe


Alignment Length:74 Identity:24/74 - (32%)
Similarity:32/74 - (43%) Gaps:3/74 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ICRYRLRGNCRFDDLCRYSHDVLQNDNLRPQISNNADEVV---GHANRYSRPMTGANATEEMKLS 72
            ||:|.|:|||:|...|..||.:..|.||....|.|....:   |.|:..:....|||.......|
pombe    73 ICKYFLKGNCKFGPKCALSHALPGNTNLPNGTSTNTMASMAANGGASSVASKQMGANQISPSLSS 137

  Fly    73 FAIAKSQDK 81
            ..:....||
pombe   138 KTMKNPADK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5334NP_572969.1 RING-HC_MKRN 81..136 CDD:438184 1/1 (100%)
SPOM_SPCC1739.01NP_588409.2 ZnF_C3H1 43..67 CDD:214632
ZnF_C3H1 72..92 CDD:214632 9/18 (50%)
YTH1 86..379 CDD:227416 16/61 (26%)
Blue background indicates that the domain is not in the aligned region.

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