DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Ntng1

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_006502418.1 Gene:Ntng1 / 80883 MGIID:1934028 Length:581 Species:Mus musculus


Alignment Length:623 Identity:143/623 - (22%)
Similarity:206/623 - (33%) Gaps:282/623 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AYGNPVQASSVCGAQQPERYCELLRDGNAGECRSCEQQRYGPAALTDLNNPSNVTCWRSGAVNVP 115
            |.|||...::.|.|..||                   ..:.|..:.|.......|.|:|....  
Mouse    81 AMGNPYMCNNECDASTPE-------------------LAHPPELMFDFEGRHPSTFWQSATWK-- 124

  Fly   116 HDPDSAPPDNVTLTLSLGKKYELT-YISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQC-Q 178
               :...|..|.:|||..|..||| .|.::|  .|.|||.:.:.||.|:|:||||:|:|::.| .
Mouse   125 ---EYPKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLH 184

  Fly   179 KFYGRPDRAK-ISKFNEQEARCINSQHDTGGAA----------QRFAF---------NTLEGRPS 223
            .|:..|...| :|:....|..| ..::.||.:.          .||||         .:|.|:  
Mouse   185 AFHMDPKSVKDLSQHTVLEIIC-TEEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQ-- 246

  Fly   224 ANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQ 288
               ||::..|:|:.|.||:|:         :||:......|.||                     
Mouse   247 ---LDTTKKLRDFFTVTDLRI---------RLLRPAVGEIFVDE--------------------- 278

  Fly   289 DEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKL 353
                                             |||                  :.|        
Mouse   279 ---------------------------------LHL------------------ARY-------- 284

  Fly   354 AATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATV 418
                                                   .||:||..|.||||||.||:.|:...
Mouse   285 ---------------------------------------FYAISDIKVRGRCKCNLHATSCLYDN 310

  Fly   419 SSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRP 483
            |.                                      :||.|:|||.||:|.:||..|..||
Mouse   311 SK--------------------------------------LTCECEHNTTGPDCGKCKKNYQGRP 337

  Fly   484 WG--------RATDND----------------------------------------------ANE 494
            |.        :.|.|.                                              ||.
Mouse   338 WSPGSYLPIPKGTANTCIPSISSIGTPPKFNRIWPNISSLEVSNPKQVAPKLALSTVSSVQVANH 402

  Fly   495 CKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCK 559
            .:.|:|.||:.||.: ::|      ::..:|.:|:|:|.|::|..||.||:|:|:...:...||.
Mouse   403 KRDCECFGHSNRCSY-IDL------LNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCI 460

  Fly   560 RCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRCARG 597
            .|.|:|:||....||. ||.|.||.|.||..|:.|..|
Mouse   461 ECYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532 63/231 (27%)
EGF_Lam <458..484 CDD:238012 13/25 (52%)
EGF_Lam 498..555 CDD:238012 19/56 (34%)
EGF_Lam 560..608 CDD:238012 18/38 (47%)
NTR_netrin-1_like 661..791 CDD:239634
Ntng1XP_006502418.1 Laminin_N 71..295 CDD:365840 75/373 (20%)
EGF_Lam 296..342 CDD:238012 24/83 (29%)
EGF_Lam 406..454 CDD:238012 19/54 (35%)
EGF_Lam 462..509 CDD:214543 18/37 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3512
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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