DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetB and ntn5

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_001920036.4 Gene:ntn5 / 796299 ZFINID:ZDB-GENE-130530-593 Length:839 Species:Danio rerio


Alignment Length:859 Identity:266/859 - (30%)
Similarity:400/859 - (46%) Gaps:240/859 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MGLLLPIILALAIGSSAAGISSNDPCY-FEGKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYCE 72
            :.||.||:..    |..:..|.:|||| .:|:||.||..|:|.|||.||                
Zfish    25 LSLLSPILSQ----SPLSWTSPHDPCYHLDGRPRHCLSEFINTAYGVPV---------------- 69

  Fly    73 LLRDGNAGECRSCEQQRYGP----AALTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLG 133
                       :.|..:.||    :.||||:||.|:|||.:.        :.:...:.||.:.||
Zfish    70 -----------TMEDLQQGPKTNISTLTDLHNPHNLTCWTAS--------EGSSGGDWTLMVPLG 115

  Fly   134 KKYELTYISLSFCPR--SPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRA-KISKFNEQ 195
            :::|:|||||.||.:  |....|:.|.||.||||:|:|.||||:.|...:|||.:: .::|..|.
Zfish   116 RRFEITYISLQFCQQVDSVESYSITILKSMDFGQSWRPLQFYSNDCMGSFGRPAQSIALTKHQET 180

  Fly   196 EARCINS---QHDTGGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLK 257
            |..|.:.   |...|...  .||:||:||||:.|.|.|..||||||||||::|||:     .:.|
Zfish   181 EPLCSDPRPLQKHRGNIV--LAFSTLDGRPSSPDFDYSPGLQDWVTATDIKIVFHQ-----SMDK 238

  Fly   258 VKNANAFSDEMGGSREEDEDDDADLELDGEQD-----------------------------EYDY 293
            :|......:|:||:....|..|..|.. ||::                             :..:
Zfish   239 MKKQEEKMNEVGGAYRWRERGDKALRF-GEKNTGTKATDVWGNSREKQTSTQRFKNKSTVLQSGH 302

  Fly   294 NL----------------QDND------SADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKR 336
            |:                :||.      :.|...:..::..|..||                  |
Zfish   303 NVTRKEMGSQGRVGRGHRKDNSRPCQDGTCDRSLNIQQQSSKGREL------------------R 349

  Fly   337 QGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAV 401
            :.::.|...:.|::.:...:.            ::.|.|..||       |.|.   .|:||..|
Zfish   350 RRRNNGGRGKSHFKQRKNGSR------------QLVPSSLYAP-------TKPT---LALSDLQV 392

  Fly   402 GGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHN 466
            |||||||||||.|              :.|.|..                       ..|.|:|:
Zfish   393 GGRCKCNGHASRC--------------RRDNQGH-----------------------AVCQCEHH 420

  Fly   467 TAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHD 531
            |:||:|:.|:.|::||||.|||.:..:.|..|:||||:.:|||::.:|:.|||||||||..|:|.
Zfish   421 TSGPDCDMCEQFFYDRPWQRATPSQPHPCVPCECNGHSNKCRFSMAVYQQSGRVSGGVCLKCRHH 485

  Fly   532 TTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRCAR 596
            ||||:|.:|:.||.||.:|..||||.|:.|.|||||:.|:.||..:|||.|:|||.|..|||||.
Zfish   486 TTGRHCQFCQNGYMRDHSKALNHRKACQPCQCHPVGAVGRWCNQSTGQCLCREGVIGQRCNRCAP 550

  Fly   597 GYQQTRSHVAPCIKV-----PTNANMIQAESAGGGGGGGTGDYKDGGGSQVEEMKKYCGKCKASP 656
            ||:|..|.:.|||::     ||.....|              |..|     ||...||...:|. 
Zfish   551 GYKQGHSPLRPCIRIQEVAPPTPVYQPQ--------------YSIG-----EECVSYCPPSQAR- 595

  Fly   657 KKLNLNKFCMEDYAILAKVIGHDRASQDISTEKFSIERQNEIYKYEINIQTIFKRNPMSGTTSSL 721
            .::||..:|::||.:..:|              .|.||....:::.|.:|::|:..      ||.
Zfish   596 VRMNLETYCLKDYVLKVQV--------------KSKERSGPWWQFSILVQSVFRMG------SSH 640

  Fly   722 LGRGNMMLLVPRKSIECQCPKIKLNKSYLILGRDSEAAPGY------LAIGPSSVVLEWKDEWSL 780
            :.||...|.||.:.:.|.||.:::.:::|::|.: |:...:      |....:::.|:|::.||.
Zfish   641 VKRGLQALWVPDRDVSCGCPALQMGRTFLLIGAE-ESRRSWVPEERRLVADRTTMALQWREHWSP 704

  Fly   781 RMKRF--QRRARKC 792
            :::.|  |....||
Zfish   705 KLRGFRGQDTRGKC 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532 88/233 (38%)
EGF_Lam <458..484 CDD:238012 11/25 (44%)
EGF_Lam 498..555 CDD:238012 32/56 (57%)
EGF_Lam 560..608 CDD:238012 26/47 (55%)
NTR_netrin-1_like 661..791 CDD:239634 31/137 (23%)
ntn5XP_001920036.4 Laminin_N 51..233 CDD:322101 84/218 (39%)
EGF_Lam 395..440 CDD:238012 25/81 (31%)
EGF_Lam 451..509 CDD:238012 32/57 (56%)
Laminin_EGF 515..557 CDD:278482 25/41 (61%)
NTR_netrin-1_like 603..718 CDD:239634 30/135 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8752
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368755at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104609
Panther 1 1.100 - - O PTHR10574
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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