DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and ntng1a

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_009295804.2 Gene:ntng1a / 569075 ZFINID:ZDB-GENE-091118-13 Length:545 Species:Danio rerio


Alignment Length:635 Identity:147/635 - (23%)
Similarity:219/635 - (34%) Gaps:254/635 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 CGAQQPERYCELLRDGNAGECRS-C----EQQRYGPAALTDLNNPSNVTCWRSGA-VNVPHDPDS 120
            || ..||.||.|   .|...|.: |    ::..:.|..:.|:...:..|.|:|.: ...|     
Zfish    72 CG-DPPETYCTL---ENPYMCNNECDAATDELAHPPELMFDIVGRNPTTFWQSTSWKKYP----- 127

  Fly   121 APPDNVTLTLSLGKKYELT-YISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQC-QKFYGR 183
             .|..|.:|||..|..||| .|.::|  .|.||:.:.:.||.|:|::|||:|||::.| ..|...
Zfish   128 -KPLAVNITLSWNKTIELTDDIVITF--ESGRPEQMVLEKSLDYGRSWQPYQFYATDCLDAFTME 189

  Fly   184 PDRAK-ISKFNEQEARCINSQHDTG-----------GAAQRFAFNTLEGRPSAND-------LDS 229
            |...| |::....:..| ..::..|           ....|||   |...|..::       ||:
Zfish   190 PKTMKDITQHTLLDIIC-TEEYSRGYVWKNDKTVRFEIRDRFA---LFAGPKLHNMASLYGQLDT 250

  Fly   230 SLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYN 294
            :..|:|:.|.||:|:         :||:........||...||                      
Zfish   251 TKNLRDFFTITDLRI---------RLLRPATGATMVDENNLSR---------------------- 284

  Fly   295 LQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPP 359
                                                                             
Zfish   285 ----------------------------------------------------------------- 284

  Fly   360 QQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGT 424
                                            .:||:||..|.||||||.||:.|:..       
Zfish   285 --------------------------------YYYAISDIKVHGRCKCNLHANSCIYD------- 310

  Fly   425 ALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRAT- 488
                                           |..:||.|:|||.||:|.|||..:..|.|...: 
Zfish   311 -------------------------------KEKLTCECEHNTTGPDCGRCKRNFQARAWSAGSY 344

  Fly   489 ----DNDANECKM-------CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCRE 542
                ...||.|..       |:|..|:.||.: :|:      ::..:|.:|:|:|.|::||.|:.
Zfish   345 LPIPKGTANICMANYAGPVNCECYNHSNRCSY-IEV------LNAVICVSCKHNTRGQHCHLCKL 402

  Fly   543 GYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRCARGY--------Q 599
            ||||:||..|:...:|..|:|:|.||....||. :|.|.||||.||..|:.|..||        :
Zfish   403 GYYRNATAKPDDENICIDCNCNPFGSESDRCNG-TGYCRCKEGATGAMCHECLPGYLWDNGCKSR 466

  Fly   600 QTRSHVAPCIKVPTNANMIQAE-----------------SAGGGGGGGTG 632
            ...|.:..|.......|.::.:                 ..||.||..:|
Zfish   467 VCDSELLRCQNGGVCVNYVRCQCPPAYTGLLCEKPRCEKEPGGCGGSDSG 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532 62/225 (28%)
EGF_Lam <458..484 CDD:238012 13/25 (52%)
EGF_Lam 498..555 CDD:238012 21/56 (38%)
EGF_Lam 560..608 CDD:238012 20/55 (36%)
NTR_netrin-1_like 661..791 CDD:239634
ntng1aXP_009295804.2 Laminin_N 50..296 CDD:459653 71/367 (19%)
EGF_Lam 297..343 CDD:238012 23/83 (28%)
EGF_Lam 355..413 CDD:238012 21/64 (33%)
EGF_Lam 421..468 CDD:238012 19/47 (40%)
EGF_CA <475..499 CDD:238011 2/23 (9%)
Blue background indicates that the domain is not in the aligned region.

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