DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and LAMB2

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_002283.3 Gene:LAMB2 / 3913 HGNCID:6487 Length:1798 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
LAMB2NP_002283.3 Laminin_N 57..281 CDD:278484
EGF_Lam 283..335 CDD:238012
EGF_Lam 347..399 CDD:238012
Laminin_EGF 410..467 CDD:278482
EGF_Lam 469..520 CDD:238012
EGF_Lam 521..562 CDD:238012
Laminin_EGF 783..831 CDD:278482
Laminin_EGF 831..879 CDD:278482
EGF_Lam 876..921 CDD:238012
EGF_Lam 926..984 CDD:238012
Laminin_EGF 986..>1028 CDD:278482
EGF_Lam 1037..1093 CDD:238012
Laminin_EGF 1095..1143 CDD:278482
Laminin_EGF 1143..>1182 CDD:278482
Domain II 1190..1409
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1338..1364
Domain alpha 1410..1442
Domain I 1443..1798
MA 1445..1701 CDD:214599
ATP-synt_B <1453..1541 CDD:304375
HrpJ 1483..1670 CDD:301626
V-ATPase_G_2 1648..1755 CDD:293604
ATP-synt_B <1680..1792 CDD:304375
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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