DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and LAMA3

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_011524280.1 Gene:LAMA3 / 3909 HGNCID:6483 Length:3342 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
LAMA3XP_011524280.1 LamNT 46..297 CDD:214532
EGF_Lam 299..344 CDD:238012
Laminin_EGF 356..423 CDD:278482
EGF_Lam 425..465 CDD:238012
Laminin_EGF 491..538 CDD:278482
EGF_Lam 535..577 CDD:238012
Laminin_EGF 585..628 CDD:278482
EGF_Lam 631..682 CDD:238012
EGF_Lam 684..727 CDD:238012
Laminin_EGF 1275..1323 CDD:278482
EGF_Lam 1365..1410 CDD:238012
EGF_Lam 1413..1463 CDD:238012
LamB 1523..1650 CDD:214597
EGF_Lam 1695..1741 CDD:238012
Laminin_EGF 1743..1793 CDD:278482
Laminin_I 1854..2113 CDD:283627
Laminin_I 2071..2357 CDD:283627
ApoLp-III_like 2101..2265 CDD:304399
Laminin_II 2297..2425 CDD:283628
LamG 2444..2579 CDD:214598
LamG 2611..2751 CDD:238058
LamG 2778..2910 CDD:238058
LamG 3003..3143 CDD:238058
LamG 3167..3318 CDD:238058
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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