DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and lamb2

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_005162102.1 Gene:lamb2 / 337767 ZFINID:ZDB-GENE-081030-4 Length:1794 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
lamb2XP_005162102.1 Laminin_N 41..265 CDD:278484
EGF_Lam 267..319 CDD:238012
EGF_Lam 331..383 CDD:238012
Laminin_EGF 394..451 CDD:278482
EGF_Lam 453..504 CDD:238012
EGF_Lam 506..544 CDD:214543
EGF_Lam 767..812 CDD:214543
Laminin_EGF 815..863 CDD:278482
EGF_Lam 860..905 CDD:238012
EGF_Lam 910..980 CDD:238012
Laminin_EGF 982..1027 CDD:278482
Laminin_EGF 1034..1088 CDD:278482
Laminin_EGF 1091..1139 CDD:278482
Laminin_EGF 1139..>1178 CDD:278482
FlgN 1228..1336 CDD:298847
MscS_porin 1471..1694 CDD:289559
DUF4795 1472..1620 CDD:292662
ApoLp-III_like 1571..1748 CDD:304399
PspA_IM30 1603..1786 CDD:281941
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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