Sequence 1: | NP_001162753.1 | Gene: | NetB / 32400 | FlyBaseID: | FBgn0015774 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038954896.1 | Gene: | Lama2 / 309368 | RGDID: | 1308889 | Length: | 3121 | Species: | Rattus norvegicus |
Alignment Length: | 712 | Identity: | 161/712 - (22%) |
---|---|---|---|
Similarity: | 254/712 - (35%) | Gaps: | 239/712 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 GLLLPIILALAIGSSAAGISS--NDPCYFEGKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYCE 72
Fly 73 LL-----RDGNAGECRSCEQQRYGPAALTDLNN--PSNVTCWRSGAVNVPHDPDSAPPDNVTLTL 130
Fly 131 SLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYS---SQCQKFY------GRPDR 186
Fly 187 AKISKFNEQEARCINSQH-----DTGGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVF 246
Fly 247 HRLELPPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEP 311
Fly 312 KKHLELDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPST 376
Fly 377 AAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAP 441
Fly 442 SLANHFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARR 506
Fly 507 CRF-------NLELYKLSGR-VSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDC 563
Fly 564 HPVGSTGKTC----NHL-----SGQCPCKEGVTGLTCNRCARGYQ------------QTRSHVAP 607
Fly 608 CIKVPTNANMIQAESAGGGGGGGTGDYKDGGGSQVEEMKKYCGKCKASPKKLNLNKFCMEDY 669 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NetB | NP_001162753.1 | LamNT | 37..261 | CDD:214532 | 56/244 (23%) |
EGF_Lam | <458..484 | CDD:238012 | 10/25 (40%) | ||
EGF_Lam | 498..555 | CDD:238012 | 23/64 (36%) | ||
EGF_Lam | 560..608 | CDD:238012 | 19/68 (28%) | ||
NTR_netrin-1_like | 661..791 | CDD:239634 | 2/9 (22%) | ||
Lama2 | XP_038954896.1 | Laminin_N | 39..284 | CDD:395009 | 69/379 (18%) |
EGF_Lam | 286..333 | CDD:238012 | 22/82 (27%) | ||
Laminin_EGF | 413..470 | CDD:395007 | 19/56 (34%) | ||
Laminin_EGF | 468..514 | CDD:395007 | 9/53 (17%) | ||
Laminin_B | 582..721 | CDD:395006 | |||
EGF_Lam | 755..804 | CDD:238012 | |||
EGF_Lam | 805..862 | CDD:238012 | |||
EGF_Lam | 863..915 | CDD:238012 | |||
EGF_Lam | 916..963 | CDD:238012 | |||
EGF_Lam | 966..1010 | CDD:214543 | |||
EGF_Lam | 1012..1057 | CDD:238012 | |||
Laminin_EGF | 1059..1107 | CDD:395007 | |||
Laminin_EGF | 1105..1162 | CDD:395007 | |||
LamB | 1228..1363 | CDD:214597 | |||
EGF_Lam | <1378..1406 | CDD:238012 | |||
Laminin_EGF | 1419..1465 | CDD:395007 | |||
Laminin_EGF | 1468..1523 | CDD:395007 | |||
EGF_Lam | 1526..>1563 | CDD:238012 | |||
Laminin_I | 1593..1851 | CDD:310534 | |||
SMC_prok_B | <1675..>2033 | CDD:274008 | |||
Laminin_II | 2036..2171 | CDD:368703 | |||
Laminin_G_1 | 2173..2313 | CDD:395008 | |||
Laminin_G_1 | 2367..2506 | CDD:395008 | |||
LamG | 2527..2689 | CDD:238058 | |||
Laminin_G_1 | 2792..2920 | CDD:395008 | |||
LamG | 2940..3092 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |