Sequence 1: | NP_001162753.1 | Gene: | NetB / 32400 | FlyBaseID: | FBgn0015774 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003750185.1 | Gene: | Lamb1 / 298941 | RGDID: | 1306311 | Length: | 1834 | Species: | Rattus norvegicus |
Alignment Length: | 857 | Identity: | 184/857 - (21%) |
---|---|---|---|
Similarity: | 298/857 - (34%) | Gaps: | 279/857 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RATGTRM-GLLLPIILALAIGSSA---AGISSNDPCYFEG-KPRKCLPSFVNAAYG--NPVQASS 60
Fly 61 VCGAQQPERYCELLRDGNAGECRSCE-QQRYGPAALTD---LNN------PSNVTCWRSGAVNVP 115
Fly 116 HDPDSAPPDNVTLTLSLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKF 180
Fly 181 YGRPDRAKISKFNE--QEARCINSQHDTGGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIR 243
Fly 244 VVFHRLELPPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEY 308
Fly 309 EEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTP 373
Fly 374 PSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTP 438
Fly 439 SAPSLANHFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGH 503
Fly 504 ARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGS 568
Fly 569 -TGKTCNH--------LSGQCPCKEGVTGLTCNRCARGYQQTRSHVAPCIKVPTNANMIQAESAG 624
Fly 625 GGGGGGTGDYKDG--------GGSQVEE-MKKYCG------KCKASPKKLN--LNKFCMED---Y 669
Fly 670 AILAKVIGHDRASQDISTEKFSIERQNEIYKYEINIQTIFKRNPMSGTTSSLLGRGNMMLLVPRK 734
Fly 735 SIECQCPKIKLNKSYLILGRDSEAAPGYLAIGPSSVVLEW---------------------KDEW 778
Fly 779 SLRMKRFQRRAR 790 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NetB | NP_001162753.1 | LamNT | 37..261 | CDD:214532 | 50/238 (21%) |
EGF_Lam | <458..484 | CDD:238012 | 12/25 (48%) | ||
EGF_Lam | 498..555 | CDD:238012 | 23/56 (41%) | ||
EGF_Lam | 560..608 | CDD:238012 | 17/56 (30%) | ||
NTR_netrin-1_like | 661..791 | CDD:239634 | 30/154 (19%) | ||
Lamb1 | XP_003750185.1 | Laminin_N | 92..317 | CDD:278484 | 60/364 (16%) |
EGF_Lam | 319..371 | CDD:238012 | 26/80 (33%) | ||
EGF_Lam | 383..435 | CDD:238012 | 23/51 (45%) | ||
Laminin_EGF | 446..503 | CDD:278482 | 18/62 (29%) | ||
EGF_Lam | 505..556 | CDD:238012 | 7/50 (14%) | ||
EGF_Lam | 557..>596 | CDD:238012 | 10/40 (25%) | ||
EGF_Lam | 821..866 | CDD:214543 | |||
Laminin_EGF | 869..917 | CDD:278482 | |||
EGF_Lam | 914..959 | CDD:238012 | |||
Laminin_EGF | 965..1021 | CDD:278482 | |||
Laminin_EGF | 1024..1068 | CDD:278482 | |||
Laminin_EGF | 1076..1129 | CDD:278482 | |||
Laminin_EGF | 1132..1180 | CDD:278482 | |||
Laminin_EGF | 1180..1230 | CDD:278482 | |||
MA | 1500..1739 | CDD:214599 | |||
MCP_signal | 1504..1706 | CDD:304920 | |||
Prefoldin | 1654..1768 | CDD:298833 | |||
RILP-like | <1738..1826 | CDD:304877 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |