DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Ntng1

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_001099935.1 Gene:Ntng1 / 295382 RGDID:1563465 Length:539 Species:Rattus norvegicus


Alignment Length:581 Identity:143/581 - (24%)
Similarity:204/581 - (35%) Gaps:240/581 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AYGNPVQASSVCGAQQPERYCELLRDGNAGECRSCEQQRYGPAALTDLNNPSNVTCWRSGAVNVP 115
            |.|||...::.|.|..||                   ..:.|..:.|.......|.|:|....  
  Rat    81 AMGNPYMCNNECDASTPE-------------------LAHPPELMFDFEGRHPSTFWQSATWK-- 124

  Fly   116 HDPDSAPPDNVTLTLSLGKKYELT-YISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQC-Q 178
               :...|..|.:|||..|..||| .|.::|  .|.|||.:.:.||.|:|:||||:|:|::.| .
  Rat   125 ---EYPKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLH 184

  Fly   179 KFYGRPDRAK-ISKFNEQEARCINSQHDTGGAA----------QRFAF---------NTLEGRPS 223
            .|:..|...| :|:....|..| ..::.||.:.          .||||         .:|.|:  
  Rat   185 AFHMDPKSVKDLSQHTVLEIIC-TEEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQ-- 246

  Fly   224 ANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQ 288
               ||::..|:|:.|.||:|:         :||:......|.||                     
  Rat   247 ---LDTTKKLRDFFTVTDLRI---------RLLRPAVGEIFVDE--------------------- 278

  Fly   289 DEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKL 353
                                             |||                  :.|        
  Rat   279 ---------------------------------LHL------------------ARY-------- 284

  Fly   354 AATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATV 418
                                                   .||:||..|.||||||.||:.||...
  Rat   285 ---------------------------------------FYAISDIKVRGRCKCNLHATMCVYDN 310

  Fly   419 SSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRP 483
            |.                                      :||.|:|||.||:|.:||..|..||
  Rat   311 SK--------------------------------------LTCECEHNTTGPDCGKCKKNYQGRP 337

  Fly   484 WGRAT-----DNDANEC-------KMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRY 536
            |...:     ...||.|       ..|:|.||:.||.: ::|      ::..:|.:|:|:|.|::
  Rat   338 WSPGSYLPIPKGTANTCIPSISSIGNCECFGHSNRCSY-IDL------LNTVICVSCKHNTRGQH 395

  Fly   537 CHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRCARG 597
            |..||.||:|:|:...:...||..|.|:|:||....||. ||.|.||.|.||..|:.|..|
  Rat   396 CELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPG 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532 63/231 (27%)
EGF_Lam <458..484 CDD:238012 13/25 (52%)
EGF_Lam 498..555 CDD:238012 19/56 (34%)
EGF_Lam 560..608 CDD:238012 18/38 (47%)
NTR_netrin-1_like 661..791 CDD:239634
Ntng1NP_001099935.1 Laminin_N 50..295 CDD:459653 75/373 (20%)
EGF_Lam 296..342 CDD:238012 25/83 (30%)
EGF_Lam 364..412 CDD:238012 19/54 (35%)
EGF_Lam 420..467 CDD:214543 18/37 (49%)
EGF_CA <474..498 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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