Sequence 1: | NP_001162753.1 | Gene: | NetB / 32400 | FlyBaseID: | FBgn0015774 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001289148.1 | Gene: | Ush2a / 289369 | RGDID: | 628777 | Length: | 5191 | Species: | Rattus norvegicus |
Alignment Length: | 632 | Identity: | 130/632 - (20%) |
---|---|---|---|
Similarity: | 203/632 - (32%) | Gaps: | 261/632 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 VQASSVCGAQQP------ERYCELLRDGNAGECRSCEQQRYGPAA--LTDLNNPSNVTCWRSGAV 112
Fly 113 NVPHDPDSAPPDNVTLTLSL---GKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYS 174
Fly 175 SQCQKFYGRPDRAKISKFNEQEARCINSQHDTGGAAQRFAFNTL----EGRPSANDLDSSLVLQD 235
Fly 236 WVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDS 300
Fly 301 ADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKV 365
Fly 366 TPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQD 430
Fly 431 DGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACK-HN-TAGPECERCKPFYFDRPWGRATDNDAN 493
Fly 494 ECKMCQCNGHARRCRF--NLELYKLS-GRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHR 555
Fly 556 KVCKRCDCHPVGS--------------------TGK----------------------------- 571
Fly 572 ------TCNHLSGQCPCKEGVTGLTCNRCARGYQQTRSHVA----PC 608 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NetB | NP_001162753.1 | LamNT | 37..261 | CDD:214532 | 45/219 (21%) |
EGF_Lam | <458..484 | CDD:238012 | 12/27 (44%) | ||
EGF_Lam | 498..555 | CDD:238012 | 25/59 (42%) | ||
EGF_Lam | 560..608 | CDD:238012 | 24/106 (23%) | ||
NTR_netrin-1_like | 661..791 | CDD:239634 | |||
Ush2a | NP_001289148.1 | LamGL | 144..279 | CDD:214722 | |
Laminin_N | 312..512 | CDD:295486 | 48/343 (14%) | ||
Laminin_EGF | 514..561 | CDD:278482 | 20/84 (24%) | ||
EGF_Lam | 570..635 | CDD:238012 | 26/64 (41%) | ||
EGF_Lam | 637..688 | CDD:238012 | 5/50 (10%) | ||
Laminin_EGF | 690..740 | CDD:278482 | 19/49 (39%) | ||
EGF_Lam | 742..787 | CDD:238012 | 2/2 (100%) | ||
Laminin_EGF | 791..840 | CDD:278482 | |||
Laminin_EGF | 843..893 | CDD:278482 | |||
EGF_Lam | 895..944 | CDD:238012 | |||
EGF_Lam | 946..996 | CDD:238012 | |||
EGF_Lam | 997..>1034 | CDD:238012 | |||
fn3 | 1054..1127 | CDD:278470 | |||
FN3 | 1152..1234 | CDD:238020 | |||
FN3 | 1238..1350 | CDD:238020 | |||
FN3 | 1361..1444 | CDD:214495 | |||
Laminin_G_2 | 1540..1668 | CDD:280389 | |||
LamG | 1706..1856 | CDD:238058 | |||
FN3 | 1946..2041 | CDD:238020 | |||
FN3 | 2044..2125 | CDD:238020 | |||
FN3 | 2133..2223 | CDD:238020 | |||
FN3 | 2231..2303 | CDD:238020 | |||
FN3 | 2319..2418 | CDD:238020 | |||
FN3 | 2422..2518 | CDD:238020 | |||
FN3 | 2530..2608 | CDD:238020 | |||
FN3 | 2610..2708 | CDD:238020 | |||
FN3 | 2713..2788 | CDD:238020 | |||
FN3 | 2810..2909 | CDD:238020 | |||
FN3 | 2914..3004 | CDD:238020 | |||
FN3 | <3439..3484 | CDD:238020 | |||
FN3 | 3487..3564 | CDD:238020 | |||
FN3 | 3584..3662 | CDD:238020 | |||
FN3 | 3670..3748 | CDD:238020 | |||
FN3 | 3762..3852 | CDD:238020 | |||
FN3 | 3865..3950 | CDD:238020 | |||
FN3 | 3954..4051 | CDD:238020 | |||
FN3 | 4151..4248 | CDD:238020 | |||
FN3 | 4258..4341 | CDD:238020 | |||
FN3 | 4346..4418 | CDD:238020 | |||
FN3 | 4433..4517 | CDD:238020 | |||
FN3 | 4519..4617 | CDD:238020 | |||
FN3 | 4643..4710 | CDD:238020 | |||
FN3 | 4722..4798 | CDD:238020 | |||
FN3 | 4815..4916 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |