DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Lamb2

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_037106.1 Gene:Lamb2 / 25473 RGDID:2988 Length:1801 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
Lamb2NP_037106.1 Laminin_N 60..284 CDD:278484
EGF_Lam 286..338 CDD:238012
EGF_Lam 350..402 CDD:238012
Laminin_EGF 413..470 CDD:278482
EGF_Lam 472..523 CDD:238012
EGF_Lam 524..565 CDD:238012
EGF_Lam 786..831 CDD:214543
Laminin_EGF 834..882 CDD:278482
Laminin_EGF 880..927 CDD:278482
EGF_Lam 929..987 CDD:238012
Laminin_EGF 989..>1031 CDD:278482
Laminin_EGF 1041..1095 CDD:278482
Laminin_EGF 1098..1146 CDD:278482
Laminin_EGF 1146..>1185 CDD:278482
Domain II 1193..1412
Domain alpha 1413..1445
Domain I 1446..1801
DUF4398 <1446..1516 CDD:291044
flagell_FliJ 1477..1617 CDD:131526
HrpJ 1485..1673 CDD:301626
MscS_porin 1582..1776 CDD:289559
ATP-synt_B <1684..1795 CDD:304375
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1684..1703
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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