DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Ntn5

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_006540948.1 Gene:Ntn5 / 243967 MGIID:2685330 Length:523 Species:Mus musculus


Alignment Length:804 Identity:196/804 - (24%)
Similarity:271/804 - (33%) Gaps:345/804 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PIILALAIGSSAAGISSNDPCYFE-GKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYCELLRDG 77
            ||.|:|.:..|.|   ::||||.. |:||.|||         ||                     
Mouse    20 PITLSLLLLLSQA---TSDPCYDPGGRPRFCLP---------PV--------------------- 51

  Fly    78 NAGECRSCEQQRYGPAALTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLGKKYELTYIS 142
                     .|..|.||.     |.:.||....|       ...|..|.:|||.|...:.||.::
Mouse    52 ---------TQLVGKAAA-----PCSQTCALPAA-------SPGPACNSSLTLDLDGSFLLTSVT 95

  Fly   143 LSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKISKFNEQEARCINSQHDTG 207
            |.||  :..|.:|.:..:...|..|:|          .:.||                       
Mouse    96 LRFC--TAGPPALVLSAAWATGGPWRP----------LWRRP----------------------- 125

  Fly   208 GAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGSR 272
                                                                   |:...:||  
Mouse   126 -------------------------------------------------------AWPGALGG-- 133

  Fly   273 EEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQ 337
                                                                             
Mouse   134 ----------------------------------------------------------------- 133

  Fly   338 GKHKGSAYEKHYQSKLAATTPPQQPPKVT---PPGKVTPPSTAAPSAAASAVTLPISQHYAVSDF 399
                                    |.|||   |||    |.|   ...||.:.:.......:...
Mouse   134 ------------------------PKKVTFHSPPG----PKT---RIVASYLRVEFGGKAGLVTT 167

  Fly   400 AVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACK 464
            .|.|||:|:|||:.|.                     |.:.|.                 .|.|:
Mouse   168 GVRGRCQCHGHAARCA---------------------TRAQPP-----------------RCRCR 194

  Fly   465 HNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQ 529
            |:|.||.||.|:|.:.|.||..||....:.|..|.||.||||||||.||::|||..|||||..|:
Mouse   195 HHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCR 259

  Fly   530 HDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRC 594
            |.|.||:||||:.|::||.::|....|.|:.|.|||:|:||..||..||||.||.||||||||||
Mouse   260 HHTAGRHCHYCQPGFWRDPSQPITSHKACRACQCHPIGATGGMCNQTSGQCSCKLGVTGLTCNRC 324

  Fly   595 ARGYQQTRSHVAPCIKVPTNANMIQAESAGGGGGGGTGDYKDGGGSQVEE--------------- 644
            ..||||:||...||          |.||.             |..|::.|               
Mouse   325 GPGYQQSRSPRMPC----------QRESY-------------GTRSRIPEATTTPATTPVASRSD 366

  Fly   645 --MKKYCGKCKASPKKLNLNKFCMEDYAILAKVIGHDRASQDISTEKFSIERQNEIYKYEINIQT 707
              .:.|| ....|...::|.::|.:||.:.|:|    .||....:|...    .|.::..:::..
Mouse   367 PQCQGYC-NVSVSSVHMSLQRYCQQDYVLHAQV----SASSSQPSEAVG----PEWWRLAVHVLA 422

  Fly   708 IFKRNPMSGTTSSLLGRGNMMLLVPRKSIECQCPKIKLNKSYLILGR------DSEAAPGYLAIG 766
            :||:....      :.||.....|||..:.|.|.:::....||:|||      |....|..|.:.
Mouse   423 VFKQRAWP------VRRGGQEAWVPRADLICGCLRLRPGADYLLLGRAAQTHDDDNYDPARLILN 481

  Fly   767 PSSVVLEWKDEWSLRMKRFQRRAR 790
            ...:.|.|:..|:..::|.|::.|
Mouse   482 RHGLALPWRPRWARPLRRLQQKER 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532 34/224 (15%)
EGF_Lam <458..484 CDD:238012 11/25 (44%)
EGF_Lam 498..555 CDD:238012 34/56 (61%)
EGF_Lam 560..608 CDD:238012 31/47 (66%)
NTR_netrin-1_like 661..791 CDD:239634 33/136 (24%)
Ntn5XP_006540948.1 EGF_Lam 172..216 CDD:238012 22/81 (27%)
EGF_Lam 227..281 CDD:238012 33/53 (62%)
EGF_Lam 290..339 CDD:238012 33/58 (57%)
NTR_netrin-1_like 384..509 CDD:239634 33/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9271
eggNOG 1 0.900 - - E1_KOG3512
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10574
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.870

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