DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Ushbp1

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_852083.2 Gene:Ushbp1 / 234395 MGIID:1922920 Length:680 Species:Mus musculus


Alignment Length:305 Identity:65/305 - (21%)
Similarity:99/305 - (32%) Gaps:93/305 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 DSAPPDNVTLTLSLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGR 183
            :::||   |..|..|::...:  |.|...|.|                |.|..  ||....|..|
Mouse   216 EASPP---TPILRAGRRNSNS--STSGAERRP----------------WVPQD--SSMAHPFLQR 257

  Fly   184 PDRAKISKFNEQEARCINSQH---------DTGGAAQ----------RFAFNTLEG-RPSANDLD 228
                ..|..:.|...|:::||         |..|..|          |.....|:| :.....|.
Mouse   258 ----LRSDSSTQSFGCLSTQHPAPETYLMEDQMGQLQGSIEKLKCFNRLLLAVLQGYKGRCESLS 318

  Fly   229 SSLVLQDWVTATDIRVVFHRL----ELPPQLLKVKNANAFSDEMG---GSREEDEDDDADLELDG 286
            ..|..:: ..||.:|:.....    |:...||.:|.|.     :|   |:.:.|        |..
Mouse   319 IKLAKRE-AEATALRLALQYSEDCEEVYEVLLALKMAG-----LGTGVGTTKGD--------LQA 369

  Fly   287 EQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGS---AYEKH 348
            .:.|....|...::.    .|.|.|:.             :|:|..|.|...:...|   .|.:|
Mouse   370 AEKEASRLLMKKEAT----MEVETPQP-------------SSEGSGVDKPTPEELASQLHGYVQH 417

  Fly   349 YQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAV----TLP 389
            .:.:.|....|::...||.| |.|.|...|...|...:    |||
Mouse   418 LRERWALVKIPEELGPVTAP-KATMPHAEATVQAILEIQPGPTLP 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532 35/165 (21%)
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
Ushbp1NP_852083.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..247 10/47 (21%)
MCC-bdg_PDZ 288..351 CDD:463122 12/63 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..405 7/37 (19%)
Smc <463..>667 CDD:440809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 524..549
Blue background indicates that the domain is not in the aligned region.

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