DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and LAMB4

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_011514277.1 Gene:LAMB4 / 22798 HGNCID:6491 Length:1772 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
LAMB4XP_011514277.1 Laminin_N 38..263 CDD:278484
EGF_Lam 264..320 CDD:238012
Laminin_EGF 332..382 CDD:278482
Laminin_EGF 395..452 CDD:278482
EGF_Lam 454..503 CDD:238012
EGF_Lam 505..549 CDD:238012
EGF_Lam 768..809 CDD:238012
Laminin_EGF 822..865 CDD:278482
EGF_Lam 862..909 CDD:238012
EGF_CA <938..967 CDD:304395
Laminin_EGF 970..>1012 CDD:278482
Laminin_EGF 1033..1077 CDD:278482
Laminin_EGF 1080..1128 CDD:278482
EGF_Lam 1127..>1165 CDD:238012
Mplasa_alph_rch 1254..>1714 CDD:275316
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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