Sequence 1: | NP_001162753.1 | Gene: | NetB / 32400 | FlyBaseID: | FBgn0015774 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034813.2 | Gene: | Lamc1 / 226519 | MGIID: | 99914 | Length: | 1607 | Species: | Mus musculus |
Alignment Length: | 714 | Identity: | 221/714 - (30%) |
---|---|---|---|
Similarity: | 310/714 - (43%) | Gaps: | 238/714 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 GLLLPIILALAIGSSAAGI--SSNDPCYFE-GKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYC 71
Fly 72 ELLRDGNAGECRSCE-----QQ--RYGPAALTDLNNPSNVTCWRSGAV--NVPHDPDSAPPDNVT 127
Fly 128 LTLSLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKI-SK 191
Fly 192 FNEQEARCINSQHD----TGGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELP 252
Fly 253 PQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLEL 317
Fly 318 DDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAA 382
Fly 383 ASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHF 447
Fly 448 GRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLE 512
Fly 513 LYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLS 577
Fly 578 GQCPCKEGVTGLTCNRCARGYQQ-TRSHVAPCIKVPTNANMIQAESAGGGGGGGTGDYKDGGGSQ 641
Fly 642 V--EEMKKY-CGKCKASPKKLNLNK---------FCMEDYAILAKVIGHDRASQDISTEKFSIE 693 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NetB | NP_001162753.1 | LamNT | 37..261 | CDD:214532 | 95/238 (40%) |
EGF_Lam | <458..484 | CDD:238012 | 14/25 (56%) | ||
EGF_Lam | 498..555 | CDD:238012 | 22/56 (39%) | ||
EGF_Lam | 560..608 | CDD:238012 | 19/48 (40%) | ||
NTR_netrin-1_like | 661..791 | CDD:239634 | 9/42 (21%) | ||
Lamc1 | NP_034813.2 | LamNT | 42..282 | CDD:214532 | 110/379 (29%) |
EGF_Lam | 283..328 | CDD:238012 | 30/81 (37%) | ||
Laminin_EGF | 340..394 | CDD:278482 | 22/60 (37%) | ||
Laminin_EGF | 396..443 | CDD:278482 | 19/47 (40%) | ||
Laminin_EGF | 443..490 | CDD:278482 | 12/63 (19%) | ||
LamB | 551..676 | CDD:214597 | |||
Laminin_EGF | 722..761 | CDD:278482 | |||
EGF_Lam | 770..818 | CDD:238012 | |||
Laminin_EGF | 826..873 | CDD:278482 | |||
Laminin_EGF | 882..930 | CDD:278482 | |||
EGF_Lam | 933..978 | CDD:214543 | |||
EGF_Lam | 980..1027 | CDD:238012 | |||
Domain II and I | 1029..1607 | ||||
SPEC | 1047..1252 | CDD:295325 | |||
MA | 1089..1300 | CDD:214599 | |||
V_Alix_like | 1178..>1310 | CDD:187408 | |||
DUF5089 | 1198..1403 | CDD:293607 | |||
SH3BP5 | 1359..1585 | CDD:283045 | |||
ATP-synt_B | <1391..1503 | CDD:304375 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.870 |