Sequence 1: | NP_001162753.1 | Gene: | NetB / 32400 | FlyBaseID: | FBgn0015774 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001294008.1 | Gene: | epi-1 / 177956 | WormBaseID: | WBGene00001328 | Length: | 3715 | Species: | Caenorhabditis elegans |
Alignment Length: | 737 | Identity: | 156/737 - (21%) |
---|---|---|---|
Similarity: | 232/737 - (31%) | Gaps: | 320/737 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 PSFVNAAYGNPVQASSVCGAQQ----PERYCEL------------------------------LR 75
Fly 76 DGN-AGECRSCEQQRYGPAALTDLNNPSNVTCWRSGAVNVPHDPDSAPP-------DNVTLTLSL 132
Fly 133 GKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQP-FQF--YSSQCQKFYGRPDRAKISKFNE 194
Fly 195 QEARCINSQHDTGGAA------QRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPP 253
Fly 254 QLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELD 318
Fly 319 DDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAA 383
Fly 384 SAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFG 448
Fly 449 RSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLE- 512
Fly 513 -LYKLS-----GRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHP------ 565
Fly 566 ---------------------------------------VGSTGKTCNHLSGQCPCKEGVTGLTC 591
Fly 592 NRCARGYQQTRSHVAPCIKVPTNANMIQAESAGGGGGGGTGDYKDGGGSQVEEMKKYCGKCKASP 656
Fly 657 KKLNLN-------------KFC 665 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NetB | NP_001162753.1 | LamNT | 37..261 | CDD:214532 | 61/266 (23%) |
EGF_Lam | <458..484 | CDD:238012 | 11/25 (44%) | ||
EGF_Lam | 498..555 | CDD:238012 | 22/63 (35%) | ||
EGF_Lam | 560..608 | CDD:238012 | 20/92 (22%) | ||
NTR_netrin-1_like | 661..791 | CDD:239634 | 4/18 (22%) | ||
epi-1 | NP_001294008.1 | LamNT | 24..296 | CDD:214532 | 73/408 (18%) |
EGF_Lam | 297..345 | CDD:238012 | 23/81 (28%) | ||
Laminin_EGF | 427..474 | CDD:278482 | 4/46 (9%) | ||
EGF_Lam | 471..520 | CDD:238012 | 16/48 (33%) | ||
EGF_Lam | 519..564 | CDD:214543 | 9/69 (13%) | ||
Laminin_EGF | 564..612 | CDD:278482 | 1/1 (100%) | ||
Laminin_EGF | 610..658 | CDD:278482 | |||
Laminin_EGF | 656..703 | CDD:278482 | |||
Laminin_EGF | 701..753 | CDD:278482 | |||
Laminin_EGF | 756..806 | CDD:278482 | |||
EGF_Lam | 808..854 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 855..988 | CDD:271143 | |||
EGF_Lam | 1425..1468 | CDD:238012 | |||
EGF_Lam | 1472..1515 | CDD:238012 | |||
Laminin_EGF | 1517..1567 | CDD:278482 | |||
Laminin_EGF | 1565..1613 | CDD:278482 | |||
LamB | 1669..1793 | CDD:214597 | |||
EGF_Lam | 1840..1883 | CDD:238012 | |||
Laminin_EGF | 1891..1945 | CDD:278482 | |||
EGF_Lam | 1947..1998 | CDD:238012 | |||
EGF_Lam | 2001..2045 | CDD:214543 | |||
EGF_Lam | 2048..2092 | CDD:214543 | |||
EGF_Lam | 2095..2140 | CDD:214543 | |||
Tar | <2145..2378 | CDD:223910 | |||
BAR | 2289..2486 | CDD:299863 | |||
Apolipoprotein | 2289..2472 | CDD:279749 | |||
COG1340 | 2414..2690 | CDD:224259 | |||
ApoLp-III_like | 2510..2635 | CDD:304399 | |||
Laminin_II | 2589..2730 | CDD:283628 | |||
LamG | 2704..2875 | CDD:238058 | |||
LamG | 2909..3057 | CDD:238058 | |||
LamG | 3353..3510 | CDD:238058 | |||
LamG | 3532..3682 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |