DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Ntng2

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_598008.1 Gene:Ntng2 / 171171 MGIID:2159341 Length:589 Species:Mus musculus


Alignment Length:660 Identity:137/660 - (20%)
Similarity:204/660 - (30%) Gaps:306/660 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AGISSNDPCYFEGKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYCELLRDGNAGECRSCEQQRY 90
            :||:..||     ..|.|       ::.||...|:.|.|..|:                   ..:
Mouse    57 SGITCGDP-----PERFC-------SHENPYLCSNECDASNPD-------------------LAH 90

  Fly    91 GPAALTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLGKKYELT-YISLSFCPRSPRPDS 154
            .|..:.|..:....|.|:|  |.....|.   |....:|||..|..||| .:.::|  ...||..
Mouse    91 PPRLMFDREDEGLATYWQS--VTWSRYPS---PLEANITLSWNKSVELTDDVVVTF--EYGRPTV 148

  Fly   155 LAIFKSSDFGQTWQPFQFYSSQCQKFYG---------RPDRAKISKFNEQEARCINS---QHDTG 207
            :.:.||.|.|:||||:|||:..|.:.:|         .|..|......|:.:|...|   :|...
Mouse   149 MVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRARDMSPSSAHRVLCTEEYSRWAGSKKEKHVRF 213

  Fly   208 GAAQRFAFNTLEGRPSANDLD-------SSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFS 265
            ....|||   :...|...::|       |:..|:::.|.||:|:   || |.|.|          
Mouse   214 EVRDRFA---IFAGPDLRNMDNLYTRMESAKGLKEFFTFTDLRM---RL-LRPAL---------- 261

  Fly   266 DEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDG 330
                                                                            |
Mouse   262 ----------------------------------------------------------------G 262

  Fly   331 ESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYA 395
            .:.|:|:..:|                                                  ..||
Mouse   263 GTYVQRENLYK--------------------------------------------------YFYA 277

  Fly   396 VSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMT 460
            :|:..|.||||||.||:.|  ||..||                                    :.
Mouse   278 ISNIEVIGRCKCNLHANLC--TVREGS------------------------------------LQ 304

  Fly   461 CACKHNTAGPECERCKPFYFDRPW----------------------------------------- 484
            |.|:|||.||:|.|||..:..|.|                                         
Mouse   305 CECEHNTTGPDCGRCKKNFRTRAWRAGSYLPLPHGSPNACAAAGSAFGSQTKPPTMAPLGDSSFW 369

  Fly   485 -----------------GRATDNDANECKM-------------CQCNGHARRCRFNLELYKLSGR 519
                             .:|.|:...|.|.             |:|.||:.||.: ::...:.  
Mouse   370 PQVSSSAEAVAISVAVPSQAKDSTLFELKPRSPQVIPIEEFQDCECYGHSNRCSY-IDFLNVV-- 431

  Fly   520 VSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPCKE 584
                .|.:|:|:|.|::|.:||.||||:.:...:...||..|:|:.:||....||. :|.|.|:|
Mouse   432 ----TCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDRCNE-TGFCECRE 491

  Fly   585 GVTGLTCNRC 594
            |..|..|:.|
Mouse   492 GAVGPKCDDC 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532 61/243 (25%)
EGF_Lam <458..484 CDD:238012 12/25 (48%)
EGF_Lam 498..555 CDD:238012 18/56 (32%)
EGF_Lam 560..608 CDD:238012 14/35 (40%)
NTR_netrin-1_like 661..791 CDD:239634
Ntng2NP_598008.1 Laminin_N 60..285 CDD:278484 71/393 (18%)
NGL discriminant loop I. /evidence=ECO:0000250 69..88 7/44 (16%)
NGL discriminant loop II. /evidence=ECO:0000250 201..203 1/1 (100%)
NGL discriminant loop III. /evidence=ECO:0000250 264..267 0/2 (0%)
EGF_Lam 286..332 CDD:238012 25/83 (30%)
EGF_Lam 413..461 CDD:238012 18/54 (33%)
Laminin_EGF 469..516 CDD:278482 14/34 (41%)
EGF_2 516..546 CDD:285248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3512
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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