DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Lamb2

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_032509.2 Gene:Lamb2 / 16779 MGIID:99916 Length:1799 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
Lamb2NP_032509.2 Laminin_N 64..284 CDD:365840
EGF_Lam 286..338 CDD:238012
EGF_Lam 350..402 CDD:238012
Laminin_EGF 413..470 CDD:365839
EGF_Lam 472..523 CDD:238012
EGF_Lam 524..565 CDD:238012
Laminin_EGF 784..832 CDD:365839
Laminin_EGF 832..880 CDD:365839
EGF_Lam 877..922 CDD:238012
EGF_Lam 927..985 CDD:238012
Laminin_EGF 987..>1029 CDD:365839
Laminin_EGF 1039..1093 CDD:365839
Laminin_EGF 1096..1144 CDD:365839
Laminin_EGF 1144..1191 CDD:365839
Domain II 1191..1410
Smc <1257..1789 CDD:224117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1339..1365
Domain alpha 1411..1443
Domain I 1444..1799
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1679..1701
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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