DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Lama5

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_006500638.1 Gene:Lama5 / 16776 MGIID:105382 Length:3745 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012
EGF_Lam 498..555 CDD:238012
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
Lama5XP_006500638.1 Laminin_N 59..303 CDD:365840
EGF_Lam 304..352 CDD:238012
EGF_Lam 363..426 CDD:238012
EGF_Lam 433..474 CDD:238012
EGF_Lam 500..547 CDD:214543
EGF_Lam 546..589 CDD:238012
Laminin_EGF 593..640 CDD:365839
Laminin_EGF 638..685 CDD:365839
EGF_Lam 682..724 CDD:238012
EGF_Lam 781..832 CDD:238012
EGF_Lam 833..>872 CDD:238012
Laminin_EGF 1443..1491 CDD:365839
Laminin_EGF 1533..1584 CDD:365839
Laminin_EGF 1582..1630 CDD:365839
Laminin_B 1694..1830 CDD:365838
EGF_Lam 1864..>1900 CDD:238012
Laminin_EGF 1915..1968 CDD:365839
EGF_Lam 1970..2023 CDD:238012
EGF_Lam 2025..2069 CDD:214543
EGF_Lam 2071..2117 CDD:238012
Laminin_EGF 2119..>2147 CDD:365839
Laminin_I 2194..2452 CDD:310534
DUF3584 <2355..>2618 CDD:378817
Laminin_II 2642..2764 CDD:368703
LamG 2783..2912 CDD:214598
LamG 2969..3130 CDD:214598
LamG 3182..3300 CDD:214598
LamG 3364..3522 CDD:238058
LamG 3569..3696 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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