DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and Lama5

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_001074640.1 Gene:Lama5 / 16776 MGIID:105382 Length:3718 Species:Mus musculus


Alignment Length:716 Identity:171/716 - (23%)
Similarity:252/716 - (35%) Gaps:269/716 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATGTRMGLLLPIILALA----IGSSAA----GISSNDPCYFEGKPRKCLPSFVNAAYGNPVQASS 60
            |.|.|.....|::|.||    :|.:..    |.|.:.| ||            |.|.|..:.||:
Mouse    16 ALGPRSPAPRPLLLLLAGLALVGEARTPGGDGFSLHPP-YF------------NLAEGARITASA 67

  Fly    61 VCGAQQPER---------YCELLRDGNAG----------ECRSCEQQRYGPAALTDLNNP-SNV- 104
            .||.:.|.|         ||:|:....||          .|..|      .||.::..:| ||. 
Mouse    68 TCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC------TAANSNKAHPVSNAI 126

  Fly   105 ----TCWRSGAVNVPHDPDSAPP-------DNVTLTLSLGKKYELTYISLSFCPRSPRPDSLAIF 158
                ..|:|            ||       :.|.:||.||:.:.:.|:.:.|. .|||||...:.
Mouse   127 DGTERWWQS------------PPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFA-NSPRPDLWVLE 178

  Fly   159 KSSDFGQTWQPFQFYSS---QCQKFYGRPDRAKISKFNE-----QEARCINSQHDTGGAAQRFAF 215
            :|:|||.|:||:||::|   .|.:.:|.....:|::.::     :.:|.:..::.      ....
Mouse   179 RSTDFGHTYQPWQFFASSKRDCLERFGPRTLERITQDDDVICTTEYSRIVPLENG------EIVV 237

  Fly   216 NTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGSREEDEDDDA 280
            :.:.|||.|.:...|.:|:|:..||:||:.|.|            .|.....:.|....|     
Mouse   238 SLVNGRPGALNFSYSPLLRDFTKATNIRLRFLR------------TNTLLGHLMGKALRD----- 285

  Fly   281 DLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKRQGKHKGSAY 345
                                                                             
Mouse   286 ----------------------------------------------------------------- 285

  Fly   346 EKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGH 410
                             |.||.                       ..:|::.|.::||||.|:||
Mouse   286 -----------------PTVTR-----------------------RYYYSIKDISIGGRCVCHGH 310

  Fly   411 ASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHNTAGPECERC 475
            |..|                |.:|...|                  ..:.|||:|||.|..|:||
Mouse   311 ADVC----------------DAKDPLDP------------------FRLQCACQHNTCGGSCDRC 341

  Fly   476 KPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYKLSGRVS-------GGVCYNCQHDTT 533
            .|.:..:||..||.:.||||:.|.|:|||..|.::.|:.:.:...:       ||||.:|||.||
Mouse   342 CPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTT 406

  Fly   534 GRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRCARGY 598
            |..|..|..|::|...:|.:...||:.|||....:.| ||..|:|:|.|:...||..|..||.||
Mouse   407 GINCERCLPGFFRAPDQPLDSPHVCRPCDCESDFTDG-TCEDLTGRCYCRPNFTGELCAACAEGY 470

  Fly   599 QQTRSHVAPCIKVPTNANMIQAESAG--------GGGGGGTGDYKDGGGSQVEEMKKYCGKCKAS 655
            ... .|..|....|.|....|...||        ..|..|....||          ...|:|...
Mouse   471 TDF-PHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRKD----------PRLGRCVCK 524

  Fly   656 P 656
            |
Mouse   525 P 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532 64/263 (24%)
EGF_Lam <458..484 CDD:238012 11/25 (44%)
EGF_Lam 498..555 CDD:238012 22/63 (35%)
EGF_Lam 560..608 CDD:238012 18/47 (38%)
NTR_netrin-1_like 661..791 CDD:239634
Lama5NP_001074640.1 Laminin_N 50..303 CDD:459653 75/412 (18%)
EGF_Lam 304..352 CDD:238012 23/81 (28%)
EGF_Lam 363..426 CDD:238012 22/62 (35%)
EGF_Lam 433..474 CDD:238012 17/42 (40%)
EGF_Lam 500..547 CDD:214543 7/36 (19%)
EGF_Lam 546..589 CDD:238012
Laminin_EGF 593..640 CDD:395007
Laminin_EGF 638..685 CDD:395007
EGF_Lam 682..724 CDD:238012
EGF_Lam 781..832 CDD:238012
EGF_Lam 833..>872 CDD:238012
Domain IV 1 (domain IV B) 856..1442
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1253..1284
Laminin_EGF 1443..1491 CDD:395007
Laminin_EGF 1533..1584 CDD:395007
Laminin_EGF 1582..1630 CDD:395007
LamB 1690..1819 CDD:214597
Cell attachment site. /evidence=ECO:0000255 1723..1725
Cell attachment site. /evidence=ECO:0000255 1839..1841
EGF_Lam 1864..>1900 CDD:238012
Laminin_EGF 1915..1968 CDD:395007
EGF_Lam 1970..2023 CDD:238012
EGF_Lam 2025..2069 CDD:214543
EGF_Lam 2071..2117 CDD:238012
Laminin_EGF 2119..>2147 CDD:395007
Domain II and I 2169..2735
Laminin_I 2194..2452 CDD:310534
RecN <2364..>2623 CDD:440263
Laminin_II 2642..2764 CDD:368703
LamG 2783..2912 CDD:214598
LamG 2947..3099 CDD:238058
LamG 3155..3273 CDD:214598
LamG 3337..3495 CDD:238058
LamG 3542..3669 CDD:214598
Blue background indicates that the domain is not in the aligned region.

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