DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetB and LOC101885031

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_005174519.2 Gene:LOC101885031 / 101885031 -ID:- Length:604 Species:Danio rerio


Alignment Length:733 Identity:176/733 - (24%)
Similarity:246/733 - (33%) Gaps:280/733 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IILALAIGSSAAGISSNDPCYFEGKPRKCLPSFVNAAYGNP--VQASSVCGAQQPERYCELLRDG 77
            |:|:||  :.:|..|:...|    :...|.|:..:...|..  ::|||.||....|..|     .
Zfish     5 ILLSLA--ALSAMCSAQQDC----RRGACYPAMDDLLLGREQNLRASSTCGLMGSEVVC-----S 58

  Fly    78 NAGE----CRSCEQQRYGPAALTDLNNPSNVTC-------WRSGAVNVPHDPDSAPPDNVTLTLS 131
            ..|:    |..|:.:  .|||. :.:...||..       |:|       ..|..|   |||.|.
Zfish    59 PHGQWKMKCCPCDSR--NPAAY-NAHTIQNVISSAGPNRWWQS-------KKDVNP---VTLQLD 110

  Fly   132 LGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKISKFNEQE 196
            |..:|.|..:.|||  :.||||:|.|.:|.|:|::|||..:.::.|...:.|...:....|.|..
Zfish   111 LNGQYHLETVFLSF--KGPRPDALIIERSRDYGRSWQPVLYMATNCPSTFPRVSTSFPRSFEETY 173

  Fly   197 ARCINSQHDTGGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNA 261
            ...:.|..|.....|:..|..|.                         .|..:.||.: .|::.|
Zfish   174 CYTLPSTADDPYKDQKIHFYPLR-------------------------QFADINLPNE-YKIEVA 212

  Fly   262 NAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDY 326
            :.|:    |.|                    .||                               
Zfish   213 SGFT----GLR--------------------VNL------------------------------- 222

  Fly   327 ASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPIS 391
                                            .|..|..:.||:                  .:|
Zfish   223 --------------------------------TQLGPVPSLPGR------------------GLS 237

  Fly   392 QHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAK 456
            |:||:.:..|.|.|.|:|||:.|:                   :||      :|::..:|.:.. 
Zfish   238 QYYALREMKVIGSCFCHGHANRCL-------------------QDT------SNNYLPNTPVGG- 276

  Fly   457 LTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYKLSGRVS 521
               .|.|:|||||..|:||..||.|.||..|...:.:.||.|:||.|:.||.|:.|.|:.:||.|
Zfish   277 ---MCECQHNTAGVNCDRCDDFYNDLPWRPAESGNTHACKRCECNNHSERCHFDPERYEATGRSS 338

  Fly   522 GGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHP--------------------- 565
            ||||..|.|.|||..|..|...||.:..........|.||.|.|                     
Zfish   339 GGVCDACAHHTTGPQCERCERNYYPNPLSDMRSADACLRCLCDPAGSENGGQCDAGTGVCVCKQN 403

  Fly   566 -------------------------------VGSTGKTCNHLSGQCPCKEGVTGLTCNRCARGY- 598
                                           |||....||.|:|||.|:..:.||:|:|||.|| 
Zfish   404 VEGERCDRCKAGFYNLNANNPLGCSKCSCSSVGSLSGVCNQLTGQCVCRSNMEGLSCDRCAAGYW 468

  Fly   599 -QQTRSHVAPCIKVPTNANMIQAESAGG------GGGGGT---------GDYKDG---------G 638
             ..:.|...||...|.||.....:...|      |.||.|         ||...|         |
Zfish   469 NPTSPSGCQPCGCDPDNARSATCDQRTGQCQCRPGNGGRTCSGCPDNTYGDPLIGCRRCDCDQLG 533

  Fly   639 GSQVEEMKKYCGKCKASP 656
               .|...|..|.|:..|
Zfish   534 ---TEACDKRTGVCRCKP 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532 57/236 (24%)
EGF_Lam <458..484 CDD:238012 13/25 (52%)
EGF_Lam 498..555 CDD:238012 25/56 (45%)
EGF_Lam 560..608 CDD:238012 23/101 (23%)
NTR_netrin-1_like 661..791 CDD:239634
LOC101885031XP_005174519.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.