DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and ntn4

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_031754773.1 Gene:ntn4 / 100379839 XenbaseID:XB-GENE-5823493 Length:636 Species:Xenopus tropicalis


Alignment Length:827 Identity:201/827 - (24%)
Similarity:295/827 - (35%) Gaps:288/827 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IILALAIGSSAAGISS----NDPCYFEGKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYCE--- 72
            :::.|...|..||::|    ...|     .:.|.|...|.|.|..:...:.||....|..|.   
 Frog    16 LLVLLGSFSLTAGLNSMVKIGSHC-----EKACNPRMGNLAIGRSLWTETTCGHNNTELSCTYQG 75

  Fly    73 -LLRDGNAGECRSCEQQRYGPAALTDLNNPSNV----------TCWRSGAVNVPHDPDSAPPDNV 126
             :.:.....:|..|.      |||..|::|.:.          |.|:| |.::..:         
 Frog    76 YIEQTCTEPKCDKCN------AALPRLSHPPSAMADSSFKIPRTWWQS-AKDIHRE--------- 124

  Fly   127 TLTLSLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKISK 191
            .:.|.|..::..|::.:.|  :||||.::.:.:|.|||.||.|::::|..|...:...|     .
 Frog   125 VIRLDLETEFYFTHLIMVF--KSPRPAAMILERSQDFGVTWMPYKYFSINCSATFAMED-----D 182

  Fly   192 FNEQEARCINSQHD-----TGGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLEL 251
            ..|:.|.| .|::.     |||   ...:.|:....||.| ..|...||.:..|::||       
 Frog   183 IQEKGALC-TSRYSHAFPCTGG---EVIYRTMSPPYSAQD-PYSKEAQDQLKITNLRV------- 235

  Fly   252 PPQLLKVKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLE 316
              ||||.:                                                         
 Frog   236 --QLLKQQ--------------------------------------------------------- 241

  Fly   317 LDDDHLHLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSA 381
                                                   ..|.|:......|...|         
 Frog   242 ---------------------------------------ACPCQEKNSDIKPQYFT--------- 258

  Fly   382 AASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANH 446
                       ||||.||.|.|.|.|||||..|||.             ||              
 Frog   259 -----------HYAVYDFIVKGSCFCNGHADHCVAA-------------DG-------------- 285

  Fly   447 FGRSTQMSAKLTMT---CACKHNTAGPECERCKPFYFDRPWGRAT--DNDANECKMCQCNGHARR 506
             .|..:.::|:.:.   |.||||||||.||.|.|.|.|:.|..|.  ..:||.||.|:|||||..
 Frog   286 -FRQVRTTSKIQVVHGRCICKHNTAGPHCEHCAPLYNDQLWEAANGKTGEANTCKKCKCNGHADS 349

  Fly   507 CRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGST-- 569
            |.|:::::..||..:||||.||||:|.|..|..|:.|::||...|.:....||.|.|||:||.  
 Frog   350 CHFDMDVWLGSGNRTGGVCDNCQHNTEGSQCQRCKPGFFRDLKMPFSAPDACKACSCHPIGSAVL 414

  Fly   570 --GK--TCNHLSGQCPCKEGVTGLTCNRCARGYQQTRSH-VAPCIKVPTNANMIQAESAGGGGGG 629
              |.  .|:..:|.||||.||.|..|::|..||.....: ..||             ...|....
 Frog   415 PFGNITLCDPTNGDCPCKPGVAGPHCDQCMVGYWGFGEYGCRPC-------------DCAGSCDP 466

  Fly   630 GTGD-------------------YKDGGGSQVEEMK------KYCGKCKASPKKLNLNK-FCMED 668
            .|||                   |.:...|:..|.:      ::.|||:...:.|...: ||...
 Frog   467 FTGDCITNLDIDWYREFPELLSVYNESQLSRTWEDEQGFSALRHSGKCECKEQVLGKPEVFCGMK 531

  Fly   669 YAILAKV---IGHDRASQDISTEKFSIERQNEIYKYEI--NIQTIFKRNPMSGTTSSLLGRGNMM 728
            |:.:.||   ..||:.|.  :.....|::..::.|.:|  ..:|::   |.|.|     .||   
 Frog   532 YSYVLKVKILSAHDKGSH--AEVNVKIKKVLKMSKLKILRGKRTLY---PESWT-----NRG--- 583

  Fly   729 LLVPRKSIECQCPKIKLNKSYLILGRDSEAAPGYLAIGPSSVVLEWK 775
                     |.||.:.....||:.|.: :...|.|.:...|.|..||
 Frog   584 ---------CTCPILNPGLEYLVAGYE-DIRTGRLIVNMKSFVQLWK 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532 59/242 (24%)
EGF_Lam <458..484 CDD:238012 15/28 (54%)
EGF_Lam 498..555 CDD:238012 26/56 (46%)
EGF_Lam 560..608 CDD:238012 20/54 (37%)
NTR_netrin-1_like 661..791 CDD:239634 29/121 (24%)
ntn4XP_031754773.1 Laminin_N 43..269 CDD:459653 70/378 (19%)
EGF_Lam 270..322 CDD:238012 27/79 (34%)
Laminin_EGF 341..394 CDD:395007 25/52 (48%)
EGF_Lam 404..455 CDD:214543 20/50 (40%)
NTR_netrin-4_like 526..634 CDD:239633 29/118 (25%)

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