DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and XB5969698

DIOPT Version :9

Sequence 1:NP_001162753.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_001123798.1 Gene:XB5969698 / 100170549 XenbaseID:XB-GENE-5969699 Length:1853 Species:Xenopus tropicalis


Alignment Length:740 Identity:160/740 - (21%)
Similarity:257/740 - (34%) Gaps:280/740 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IILALAIGSSAAGISSNDPCYFEG-KPRKCLPSFVNAAYG--NPVQASSVCGAQQPERYCELLRD 76
            :|..|.||.....::........| ....|.|:..|...|  ..:.|:|.||.::.:.||.:...
 Frog    24 LIFYLVIGQILGSLAQEPDVLHHGCTEGGCYPATGNLLIGRAQSLSATSTCGMEEAQEYCIVSHL 88

  Fly    77 GNAGECRSCEQQ-RYGPAA--------LTDLNNPSNVTCWRS--GAVNVPHDPDSAPPDNVTLTL 130
            .::.:|.:|:.: .|...:        ||:  .....|.|:|  |.            ::|::.|
 Frog    89 QDSEKCFACDSRVPYQKESHRIENVIYLTE--EDEEKTWWQSENGV------------ESVSIRL 139

  Fly   131 SLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQK-FYGRPDRAKISKFNE 194
            .|..::..|::.:.|  ::.||.::.|.:|:|:|:||:.::::|..|.| |.|.|..|.      
 Frog   140 DLEAEFHFTHLIMKF--KTFRPAAMLIERSADYGRTWKVYRYFSYNCTKMFPGVPIHAL------ 196

  Fly   195 QEARCINSQHDTGGAAQRFA--FNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLK 257
                   .|.|.....||::  ..:.||......||.::.::|..:| :|:          :||:
 Frog   197 -------QQIDDIICDQRYSDIEPSSEGEVIYKVLDPAITVEDPYSA-EIQ----------ELLQ 243

  Fly   258 VKNANAFSDEMGGSREEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHL 322
            :.|                                                      |.::...|
 Frog   244 ITN------------------------------------------------------LRINFTKL 254

  Fly   323 HLDYASDGESVVKRQGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVT 387
            |    :.|::::.:    :....:|:|                                      
 Frog   255 H----TLGDNLLDQ----RPEVLQKYY-------------------------------------- 273

  Fly   388 LPISQHYAVSDFAVGGRCKCNGHASEC--VATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRS 450
                  |:|.:..|.|.|.|.||||||  |..:.:|                             
 Frog   274 ------YSVYELVVRGSCFCYGHASECSPVEGIEAG----------------------------- 303

  Fly   451 TQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYK 515
              :...:...|.|||:|.|..||:|:.||.|.||..|..||.:.||.|.||.|:|:|.|::.:|.
 Frog   304 --VEGMIHGRCVCKHHTKGLNCEQCQDFYHDLPWRPAEANDPHTCKRCNCNNHSRKCHFDMAVYL 366

  Fly   516 LSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGS------------ 568
            .:|:.|||||.:|||:|.||.|..|:..||:|..........|..|||.||||            
 Frog   367 ATGKESGGVCDDCQHNTMGRNCELCKPFYYQDPRADIRADNACISCDCDPVGSLDGGVCDSHTNV 431

  Fly   569 -------------------------------------------------TGKT-CNHLSGQCPCK 583
                                                             ||.| |:.:||.|.||
 Frog   432 NLGMIAGQCRCKGNVKGERCDSCKESFYGLSMNDPVGCQPCSCDPRGIITGNTPCDQISGDCYCK 496

  Fly   584 EGVTGLTCNRCARGYQQTRSHVAPCIKVPTNANMIQAESAGGGGGGGTGDYKDGGGS---QVEEM 645
            ..|||..||:|...|....:.:..|  .|.:.:.         ||........|.|.   :...:
 Frog   497 RFVTGRYCNQCLPEYWGLSNDITGC--RPCDCDF---------GGAYNNKCSLGDGQCDCRSNII 550

  Fly   646 KKYCGKCKASPKKLNLNKFCME-DY 669
            .:.||       .:.|..|||. ||
 Frog   551 GRQCG-------DVQLGYFCMPLDY 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_001162753.1 LamNT 37..261 CDD:214532 53/240 (22%)
EGF_Lam <458..484 CDD:238012 12/25 (48%)
EGF_Lam 498..555 CDD:238012 25/56 (45%)
EGF_Lam 560..608 CDD:238012 23/109 (21%)
NTR_netrin-1_like 661..791 CDD:239634 6/10 (60%)
XB5969698NP_001123798.1 Laminin_N 62..283 CDD:278484 59/366 (16%)
EGF_Lam 284..337 CDD:238012 24/83 (29%)
Laminin_EGF 349..399 CDD:278482 24/49 (49%)
Laminin_EGF 412..469 CDD:278482 7/56 (13%)
EGF_Lam 471..522 CDD:238012 17/52 (33%)
EGF_Lam 523..>562 CDD:238012 8/54 (15%)
EGF_Lam 839..884 CDD:214543
Laminin_EGF 887..935 CDD:278482
Laminin_EGF 933..980 CDD:278482
Laminin_EGF 983..1039 CDD:278482
Laminin_EGF 1042..>1084 CDD:278482
Laminin_EGF 1094..1147 CDD:278482
Laminin_EGF 1150..1198 CDD:278482
EGF_Lam 1198..1246 CDD:238012
P-loop_NTPase <1253..1328 CDD:304359
SCP-1 <1283..1695 CDD:114219
OspD 1542..1749 CDD:281234
COG1340 1563..1846 CDD:224259
BAR 1668..1853 CDD:299863
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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