DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and qars1

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_004914154.1 Gene:qars1 / 100145804 XenbaseID:XB-GENE-5802152 Length:772 Species:Xenopus tropicalis


Alignment Length:165 Identity:37/165 - (22%)
Similarity:47/165 - (28%) Gaps:53/165 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 KVTPPSTAAPSAAASAVTLPISQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQD 434
            |||.|..|.|....:|              .|.|..|.     |..:.:....|.||.....|::
 Frog   189 KVTKPKAAEPEKKGNA--------------TVNGEVKI-----ELASLMEQLRGEALKFHKPGEN 234

  Fly   435 EDTPSAPSLANHFGRSTQMSAKLTMTCACKH--NTAGPECERCKPFYFDRPWGRATDNDANECKM 497
            ..|..            .:....||....||  .|.|....|..|    .|.|            
 Frog   235 YKTEG------------YVVTPKTMELLKKHLEITGGQVRTRFPP----EPNG------------ 271

  Fly   498 CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDT 532
            ....|||:...||....|    .:||:|:....||
 Frog   272 ILHIGHAKAINFNFGYAK----ANGGICFLRYDDT 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012 8/27 (30%)
EGF_Lam 498..555 CDD:238012 11/35 (31%)
EGF_Lam 560..608 CDD:238012
NTR_netrin-1_like 661..791 CDD:239634
qars1XP_004914154.1 PLN02859 5..771 CDD:178450 37/165 (22%)
Blue background indicates that the domain is not in the aligned region.

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