DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetB and lama2

DIOPT Version :10

Sequence 1:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_073788193.1 Gene:lama2 / 100049705 ZFINID:ZDB-GENE-060119-1 Length:3211 Species:Danio rerio


Alignment Length:603 Identity:135/603 - (22%)
Similarity:209/603 - (34%) Gaps:217/603 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GKPRKCL-PSFVNAAYGNPVQASSVCGAQQPERYCELL-----RDGNAGECRSC------EQQRY 90
            |.|::.| |:.:|.|....::.::.||...||.||:|:     |.....:||:|      :.:|:
Zfish    18 GAPQRGLFPAVLNLASMAEIKTNATCGETGPEMYCKLVEHVPGRPVKNPQCRTCDLNSDYDYERH 82

  Fly    91 GPAALTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLGKKYELTYISLSFCPRSPRPDSL 155
            ......|..|    ..|:|     |...:.....:||:||.|.:.:::.|:.|. ...||||.:.
Zfish    83 PIEFAIDGTN----RWWQS-----PSIMNGMDLHHVTVTLDLQQVFQIAYVILK-AANSPRPGNW 137

  Fly   156 AIFKSSDFGQTWQPFQFYS---SQCQKFYG-RPDRAKISKFNEQEARCI----------NSQHDT 206
            .:.:|.| |:|:.|:|:|:   ::|...|. .|.....|..::.|..|.          |.:..|
Zfish   138 ILERSLD-GETFMPWQYYAITDTECITRYNIIPRTGPPSYTHDDEVICTSFYSKIHPLENGEIHT 201

  Fly   207 GGAAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEMGGS 271
                     :.:.|||||:  |.|..|.::.:|..||:.|.|       ::..||:..:      
Zfish   202 ---------SLINGRPSAD--DPSPTLLNFTSARFIRLQFQR-------IRTLNADLMT------ 242

  Fly   272 REEDEDDDADLELDGEQDEYDYNLQDNDSADAGYDEYEEPKKHLELDDDHLHLDYASDGESVVKR 336
                                                       |.|.|..       |.:.:|.|
Zfish   243 -------------------------------------------LALHDPR-------DIDPIVTR 257

  Fly   337 QGKHKGSAYEKHYQSKLAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLPISQHYAVSDFAV 401
            :                                                      .:|::.|.:|
Zfish   258 R------------------------------------------------------YYYSIKDISV 268

  Fly   402 GGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHN 466
            ||.|.|.|||..|                           .|..|..:         .:|.|:||
Zfish   269 GGMCICYGHAKAC---------------------------PLNTHTKK---------FSCECEHN 297

  Fly   467 TAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLEL--YKLSGRV-----SGGV 524
            |.|..|:||.|.|..:||...|....:.|:.|.|:..:..|.:|..:  .|||..:     .|||
Zfish   298 TCGESCDRCCPAYNQKPWMAGTFLTRHVCEKCNCHNKSEECYYNQTVADAKLSLNIHGEYEGGGV 362

  Fly   525 CYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTC---------NHLSGQC 580
            |..|..:|.|..|..|.:|:||.:...|.....|..|.|...|:...||         :...|.|
Zfish   363 CLGCSENTGGINCQSCIDGFYRPSGVSPLEPWPCTPCTCDLRGALHSTCVPDESQATTDLPVGSC 427

  Fly   581 PCKEGVTGLTCNRCARGY 598
            .||.|..|..|:||..||
Zfish   428 ICKPGYAGEHCDRCVFGY 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetBNP_511155.1 LamNT 37..261 CDD:214532 62/248 (25%)
EGF_Lam <458..484 CDD:238012 11/25 (44%)
EGF_Lam 498..555 CDD:238012 20/63 (32%)
EGF_Lam 560..608 CDD:238012 16/48 (33%)
NTR_netrin-1_like 661..791 CDD:239634
lama2XP_073788193.1 None
Blue background indicates that the domain is not in the aligned region.

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