DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APC and Apc

DIOPT Version :10

Sequence 1:NP_001394375.1 Gene:APC / 324 HGNCID:583 Length:2871 Species:Homo sapiens
Sequence 2:NP_477152.1 Gene:Apc / 44642 FlyBaseID:FBgn0015589 Length:2417 Species:Drosophila melanogaster


Alignment Length:3039 Identity:756/3039 - (24%)
Similarity:1113/3039 - (36%) Gaps:1036/3039 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    77 DLLERLKELNLDSSNFPGVKLRSKMSL-----------RSYGSREG------SVSSRSGECSPVP 124
            ||.|.:.||:|:..:...|..|....|           ..:|:..|      ....|.||.|...
  Fly     9 DLEEGIAELSLEDVDVDSVPERKPHFLDYDAVPPPDYEEGFGASSGEQLKMDKKYERDGEVSDYE 73

Human   125 MGS--FPRRGFVNGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNLTKRIDSLPLTEN 187
            :.:  :.::.|.    :....|...:....|....:.|:...|.:           :|..|:..:
  Fly    74 LAASGYTKKEFT----QDDNTLHFTQSAVGLGSGAVGKKPAAKHF-----------LDENPIPPD 123

Human   188 FSLQTDMTRRQLEYEARQIRVAMEEQLGTCQDMEKRAQRRIARIQQIEKDILRIRQLLQSQATEA 252
            :.|            |:::|...|.     :.:::..:|:.|:.||:  |.|..|....|.|: |
  Fly   124 YML------------AQELREMREH-----RSLDRNFERQSAQQQQL--DELPPRNGGGSPAS-A 168

Human   253 ERSSQNKHETGSHDAERQNEGQGVGEINMATSGNGQGSTTRMDHE-TASVLSSSSTHSAPRRLTS 316
            .|.|::|..  |:...|..:|..........  .|...||..|.. |:|.:.::           
  Fly   169 GRPSRSKEP--SYTLSRFLDGDAPAPAPRLP--KGAAWTTSFDERYTSSAVEAT----------- 218

Human   317 HLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCISMRQSGCLPLLIQLLHGNDKDSVLLG 381
             ||:|||.|||||||||::|..:|::..|.:|.:..||.::|:|||:|||:|::|..|.|     
  Fly   219 -LGSKVECVYSLLSMLGSNDPLEMAKKFLELSGNAQSCATLRRSGCMPLLVQMMHAPDND----- 277

Human   382 NSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGM--DQD 444
                 :|.|..|..||||::||.||:|.||||.:||.||:||..||.......::....:  |.|
  Fly   278 -----QEVRKCAGQALHNVVHSHPDEKAGRREAKVLRLLDQIVDYCSFLKTLLQSGGEAIADDSD 337

Human   445 KNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGRKATRGISSQELGQGLSGGLQAIAELLQV 509
            ::|:         .|:..|||:||||||||||.||                  |.|.||..|:.:
  Fly   338 RHPL---------AAISSLMKVSFDEEHRHAMCEL------------------GALHAIPNLVHL 375

Human   510 DCEMYG-LTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIA 573
            |..::| ...|....:|||||.||||||||||..|||.||..|..|.||||||.|..:||.||.|
  Fly   376 DHAVHGPKPEDQCCNSLRRYALMALTNLTFGDENNKALLCGQKQFMEALVAQLDSAPDDLLQVTA 440

Human   574 SVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVD 638
            |||||||||||.|.|..|.|:|:|.||...|:..:.|:|||::|||||||||||:.|||:.||||
  Fly   441 SVLRNLSWRADSNMKAVLNEIGTVTALALAAMRNRSENTLKAILSALWNLSAHCSTNKAEFCAVD 505

Human   639 GALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 703
            ||||||||.|:|...:.||.|||:.|||||||||.||..|.:|||||::|||..|||.|||.|||
  Fly   506 GALAFLVGMLSYEGPSKTLKIIENAGGILRNVSSHIAVCEPYRQILRQHNCLAILLQQLKSESLT 570

Human   704 IVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYK-- 766
            :|||:||||||||||:.:||:.|||.|||.||::||||||.||:.||::||:||:..|||...  
  Fly   571 VVSNSCGTLWNLSARSAEDQKFLWDNGAVPMLRSLIHSKHAMISEGSSSALKNLLNFRPAVQNHH 635

Human   767 --DANIMSPG-SSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASHRSKQRHKQSLYGDYV 828
              |....|.| .:||:|..||.|||:.||..:|.:||.||:|                       
  Fly   636 QLDPIARSMGLKALPTLEARKAKALQQELGERHTAETCDNLD----------------------- 677

Human   829 FDTNRHDDNRSDNFNTGNMTVLSPYLNTTVLPSSSSSRGSLDSSRSEKDRSLERERGIGLGNYHP 893
                           ||                     |.||           :||.......||
  Fly   678 ---------------TG---------------------GKLD-----------KERASSSSRRHP 695

Human   894 ATENPGTSSKRGLQISTTAAQIAKVMEEVSAIHTSQEDRSSGSTTELHCVTDERNALRRSSAAHT 958
                              |.::.:     ||:.|..|.|.|..:.:..|..|.            
  Fly   696 ------------------APRLTR-----SAMLTKSESRDSVYSAKSDCAYDH------------ 725

Human   959 HSNTYNFTKSENSNRTCSMPYAKLEYKRSSNDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKFC 1023
                                            .:.|.|:||.:.|   :||.|..:..:.|    
  Fly   726 --------------------------------LIRSASASDAHRK---VKPKITDFDLEME---- 751

Human  1024 SYGQYPADLAHKIHSANHMDDNDGELDTPINYSLKYSDEQLNSGRQSPSQNERWARPKHIIEDEI 1088
                               .|.:...:.||:||:|||                            
  Fly   752 -------------------QDTEATEEQPIDYSVKYS---------------------------- 769

Human  1089 KQSEQRQSRNQSTTYPVYTESTDDKHLKFQPHFGQQECVSPYRSRGANGSETNRVGSNHGINQNV 1153
                  ::..:::||                                                  
  Fly   770 ------ENATKTSTY-------------------------------------------------- 778

Human  1154 SQSLCQEDDYEDDKPTNYSERYSEEEQHEEEERPTNYSIKYNEEKRHVDQPIDYSLKYATDIP-S 1217
                 ||.|.  |:||::|.||:|    .:.|...:.|.....:|..:..|       |..:| .
  Fly   779 -----QETDL--DQPTDFSLRYAE----NQIESDLDISGPAGGQKSTITPP-------AETVPEK 825

Human  1218 SQKQSFSFSKSSSGQSSKTEH-----MSSSSENTSTPSSNAKRQNQLHPS--SAQSRSGQPQ--- 1272
            |:.|........|.:..:||.     .:::|......::.|..:.::.|.  ...|:.|.|:   
  Fly   826 SEGQEILLILDDSVKCYQTEDTPYVISNAASVTDLRVAAKADAEAEVKPEVREVTSKEGAPKKLP 890

Human  1273 KAATCKVSSINQETIQTYCVEDTPICFSRCSSLSSLSSAEDEIG-CNQTTQEADSANTLQIAEIK 1336
            |.:.|...|...|....||.|.||..|||..|||||    ||.| .||.....|       |:||
  Fly   891 KLSQCGSGSYTPEKPINYCEEGTPGYFSRYDSLSSL----DESGKANQAIVGTD-------ADIK 944

Human  1337 EKIGTRSAEDPVSEVPAVSQHPRTKSSRLQGSSLSSESARHKAVEFSSGAKSPSKSGAQTPKSPP 1401
            .|:..:..::.......:::.|...:|.|                                    
  Fly   945 PKLEKQEEQESQPAEQVLTKPPTQANSAL------------------------------------ 973

Human  1402 EHYVQETPLMFSRCTSVSSLDSFESRSIA-----SSVQSEPCSGMVSGIISPSDLPDSPGQTMPP 1461
                 ||||||||.:|:.||.......:|     |||.|: .|.:.||:||||::||||.|:||.
  Fly   974 -----ETPLMFSRRSSMDSLVHDPDVDVANCDDKSSVVSD-FSRLASGVISPSEIPDSPTQSMPQ 1032

Human  1462 SRSKTPPPPPQTAQTKREVPKNKAPTAEKRESGPKQAAVNAAVQRVQVLPDADTLLHFATESTPD 1526
            |..:                .:.|.:.:..:|.|  ..:.|::|.::.:.: |.|..|..|.||.
  Fly  1033 SPRR----------------NSVAGSGQNVDSPP--VVIPASLQPLRSVFE-DDLSSFNVEHTPA 1078

Human  1527 GFSCSSSLSALSL--DEPFIQKDVELRIMPPVQENDNGNE-------------TESEQPKESNEN 1576
            .||.::|||.||:  ||         :....|.|.||.:|             ..:|..|.:..|
  Fly  1079 QFSTATSLSNLSIVDDE---------KAPASVAEEDNEDELLLANCINMGMQRKPTEAVKSTVVN 1134

Human  1577 QEKE-AEKTIDS----------------------------EKD------------LLDD--SDDD 1598
            .|.: ||:||.|                            .||            |.||  |:..
  Fly  1135 SEVDVAEETIRSYCTEDTPALLSKVPSNTNLSVISMSSTDPKDATAGQAQMYAHQLSDDVSSNAS 1199

Human  1599 DI-----EILEECIISAMPTKSSRKAKKPAQTASKLPPPVARK-PSQLPVYKLLPSQNRLQPQKH 1657
            |.     .:|::||...|        |||...|:..|..:.|: .::||.|  |||         
  Fly  1200 DCGGASGHLLQQCIRDGM--------KKPLGEATSDPIAMLRRGGNELPGY--LPS--------- 1245

Human  1658 VSFTPGDDMPRVYCVEGTPINFSTATSLSDLTIES----PPNELAAGEGVRGGAQSGEFEKRDTI 1718
                 .|:|.: :.||.:|.|||..:.||:||:.|    |..:|...| .....|:.|.:.:...
  Fly  1246 -----ADEMNK-FLVEDSPCNFSVVSGLSNLTVGSSLVGPAVQLKETE-PSSADQNPEMKAKPGK 1303

Human  1719 PTEGRSTDEAQGGKTSSVTIPELDDNKAEEGDILAEC--------------------------IN 1757
            ..:.|.....|....||::|...||.......|.|.|                          ||
  Fly  1304 QEQVRRPPHWQDDSLSSLSIDSEDDTNLLSQAIAAGCNRPKSNLGFSSNGKRSSSLSSSQPIAIN 1368

Human  1758 SAMPKGKSHKPFRVKKIMDQVQQASASSSAPNKNQ---------LDG--KKKKP----------- 1800
            :|......:....|:|...|...:|..||..|.||         |.|  |.|:|           
  Fly  1369 AATSASSLNSAMTVRKSQQQESYSSVDSSDSNDNQSKSLFELCILKGMYKTKEPGARAQQMQEQP 1433

Human  1801 ---TSPVKPIPQNTEYRT------------RVRKNADSKNNLNAERVFSDNKDSK-KQNLKNN-- 1847
               :|.|:..|...::.:            |.|.:....::...||   :.||.| .|...|.  
  Fly  1434 IVGSSSVQSNPSLKQFDSLPVQLPSSGQVKRQRHHHHHHHHRERER---ERKDEKLLQECINTGI 1495

Human  1848 SKVFNDKLPNNEDRVRGSFAFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKA 1912
            ||..| .:|.|.  :..|.|...|.|  |:..|       .|.|:|.....||            
  Fly  1496 SKKIN-AVPKNV--LATSAAALEPCH--PMAAT-------TSASALSTAAPDV------------ 1536

Human  1913 KENKESEAKVTSHTELTSNQQSANKTQAIAKQPI----------------NRGQPKPILQKQSTF 1961
                |.:|..||:.:   .|.|.:.:..|...||                |:|..........| 
  Fly  1537 ----EQKAHATSNPQ---QQSSTHPSSHILPNPIDAIATVTDTVRSPAAPNQGNGNASQNGLET- 1593

Human  1962 PQSSKDIPDRGAATDEKLQNFAIEN--------TPVCF--------------------------- 1991
            ...|||:.....::||..|:|.:|.        ...|.                           
  Fly  1594 ATGSKDLDSEDRSSDESNQSFIMETMVRLDSALNETCISGASEKHKDPDLMLKSVERLTMEFVTS 1658

Human  1992 -------SHNSSLSSLSDIDQENNNKENEPIKETEPPDSQGEPSKPQASGYAPKSFHVEDTPVCF 2049
                   |||.|.|     :...||..|....|:..|:....||..|.:            ||  
  Fly  1659 AEQLRSSSHNHSSS-----NSHKNNSSNNTWNESTCPNDVSFPSVSQTA------------PV-- 1704

Human  2050 SRNSSLSSLSID---SEDDLLQECISSAMPKKKKPSRLKGDNEK----HSPRNMGGILGEDLTLD 2107
                 |:|||:|   :|...|.|.|......:::|..|:|:.:.    |:....|...|.:..|.
  Fly  1705 -----LASLSLDEDATEARSLHELIEITPTNEQQPESLEGETDTLVNGHADSYSGSSGGLNFQLG 1764

Human  2108 LKDIQRPDSEHGLSPDSENFDWKAIQEGANSIVSSLHQAAAAACLSRQASSDSD------SILSL 2166
             ..:|.....  |.|....|:..:.....||.:.:....|.|..|.:.|::|.|      |:.||
  Fly  1765 -GQVQNAGVR--LEPQRLLFNGTSASIMTNSTMIAFEARALAENLLQPAATDDDTTEMTFSLNSL 1826

Human  2167 -------KSGI-SLGSPF--HLTPDQEEKPFTSNKGPRILKPGEKSTLETKKIESESKGIKGGKK 2221
                   .||: ||.|.:  |..|....:...| |.||..:....:.|..::......|      
  Fly  1827 DLDNIRPPSGMESLNSCYQDHSQPSSLRQAMPS-KSPRFARKMFPANLVARRALGHLAG------ 1884

Human  2222 VYKSLITGKVRSNSEISGQMKQPLQANMPSISRGRTMIHIPGVRN---------SSSSTSPVSKK 2277
                 ....|.|:..:...:|.|  :.|..:.  .:||.:..:::         |.::|..||..
  Fly  1885 -----SAESVNSSCNLLDNIKPP--SLMDELL--DSMISVDSIQSEVADGEQDCSMATTISVSNY 1940

Human  2278 GPPL-----------------------KTPASKSPSEGQTATTSPRGAKPSVKSEL--------- 2310
            ....                       .:.|..:|..|.|.:.:.|...|..|..|         
  Fly  1941 ETAACDDQTMTVLQSCFDEDEDATMNDYSSAESTPKHGSTPSPNRRSLTPKDKRRLTKDRFKTYT 2005

Human  2311 --------SPVARQTSQI-------GGSSKAPSRSGSRDSTPSRPAQQPLSRPI----------- 2349
                    :|.|.:|.||       ..::.:|..:|.|..:..|...|.:..|:           
  Fly  2006 IATSCEMEAPEANETLQIEIVEAAVPVATPSPRANGRRRGSAERYKTQLIECPLALIQPQPDDCP 2070

Human  2350 ---------------------------------------QSP--GRNSISPGRNG-----ISPPN 2368
                                                   :||  .:||.:...:|     :.||.
  Fly  2071 SEQLSSIRAMMQQFTFITDINIGHSQETCESTDHPEDAGESPECDQNSETESCDGQEPDQLPPPP 2135

Human  2369 KLSQL------PRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASK 2427
            .:..|      |.|..|:||.....|..|.:|.||....||:|       |.||:          
  Fly  2136 SIVDLRTSVVKPTTLEPATAVKLVRGRKKPAYVSPYSMQSQRN-------SNNAA---------- 2183

Human  2428 GLNQMNNGNGANKKVELSRMSSTKS-----SGSESDRSERPV---------LVRQSTFIKEAPSP 2478
                      .:||..||...:.:|     ||......::|.         |.||.||:|:    
  Fly  2184 ----------PSKKKTLSPTIAKRSLVPGGSGVRLPAKKKPTPPPEPAPARLERQGTFVKD---- 2234

Human  2479 TLRRKLEESASFESLSPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTI 2543
                                  .||.|..|.||:. :.|..:..||.:      .|||...... 
  Fly  2235 ----------------------EPTNSNVQVPVVE-TKPAQTSPTHRA------SKLPTKKGTA- 2269

Human  2544 EYNDGRPAKRHDIARSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSES 2608
              :.|.|:|        :.||.|:|:..:   :|...:.:::..|::..:...:|..:....|.:
  Fly  2270 --SGGSPSK--------AGSPKRIPLAPA---RRMTPQRANTSLRLAAGKSHAASRVVSGRVSST 2321

Human  2609 SEKAKSEDEKHVNSISGTKQSKENQVSAK--GTWRKIKENEFSPTNS---TSQTVSSGATNGAES 2668
            :..::|....:.:|.:....:|.|...::  ..|:::.|.:...::|   |.:|.||...|...:
  Fly  2322 TPPSRSNSNLNGSSAAAAAAAKINHAQSRIANIWKRVDEAKTKQSSSNLRTQKTKSSNMLNANGT 2386

Human  2669 KTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDSVSEK 2717
            |..:.:     |.|.|                     |||.....|..|
  Fly  2387 KPTLLR-----SSTFD---------------------NTPSTAGGVKSK 2409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APCNP_001394375.1 Suppressor_APC 137..217 CDD:463275 10/79 (13%)
ARM 350..402 CDD:214547 20/51 (39%)
APC_rep 403..476 CDD:465870 31/74 (42%)
armadillo repeat 500..536 CDD:293788 16/36 (44%)
ARM 540..581 CDD:214547 26/40 (65%)
armadillo repeat 544..581 CDD:293788 24/36 (67%)
armadillo repeat 591..623 CDD:293788 16/31 (52%)
armadillo repeat 631..672 CDD:293788 28/40 (70%)
ARM 677..717 CDD:214547 28/39 (72%)
armadillo repeat 681..715 CDD:293788 25/33 (76%)
Arm 719..759 CDD:425727 24/39 (62%)
armadillo repeat 723..759 CDD:293788 23/35 (66%)
Arm_APC_u3 760..1047 CDD:435476 50/291 (17%)
APC_u5 1064..1163 CDD:406923 4/98 (4%)
APC_r 1285..>1302 CDD:461781 8/16 (50%)
APC_u9 1311..1396 CDD:435478 13/85 (15%)
PTZ00449 <1319..1729 CDD:185628 116/482 (24%)
APC_r 1665..1688 CDD:461781 9/22 (41%)
APC_u13 1690..1743 CDD:406927 11/56 (20%)
SAMP 1744..1765 CDD:461782 6/46 (13%)
APC_u14 1774..1867 CDD:435479 30/132 (23%)
APC_u15 1901..1975 CDD:435480 15/89 (17%)
SAMP 2061..2080 CDD:461782 5/21 (24%)
APC_basic 2251..2596 CDD:428690 84/477 (18%)
EB1_binding 2698..2871 CDD:399141 5/20 (25%)
ApcNP_477152.1 ARM 251..293 CDD:214547 20/51 (39%)
armadillo repeat 258..332 CDD:293788 35/83 (42%)
APC_rep 294..360 CDD:465870 31/74 (42%)
armadillo repeat 369..403 CDD:293788 14/33 (42%)
armadillo repeat 411..448 CDD:293788 24/36 (67%)
armadillo repeat 498..539 CDD:293788 28/40 (70%)
Arm 544..584 CDD:425727 28/39 (72%)
armadillo repeat 548..582 CDD:293788 25/33 (76%)
armadillo repeat 590..624 CDD:293788 21/33 (64%)
APC_15aa 757..771 CDD:461790 7/47 (15%)
APC_r 903..926 CDD:461781 12/22 (55%)
APC_r 1066..1089 CDD:461781 11/22 (50%)
APC_r 1247..1270 CDD:461781 10/23 (43%)
Herpes_BLLF1 <2239..>2413 CDD:282904 42/218 (19%)

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