DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and Ntng1

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_006502418.1 Gene:Ntng1 / 80883 MGIID:1934028 Length:581 Species:Mus musculus


Alignment Length:516 Identity:138/516 - (26%)
Similarity:217/516 - (42%) Gaps:151/516 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAHEPRACIPD------FVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPA 101
            |..:..||.|:      ::....|.|.:   |||.. .:.:|...:.....:.||.:.|..:.|.
Mouse    43 KVWDYTACQPESTDMTKYLKVKLDPPDI---TCGDP-PESFCAMGNPYMCNNECDASTPELAHPP 103

  Fly   102 RSLTDLNNSNNVTCWRS-------EPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVI 159
            ..:.|....:..|.|:|       :|:     .|.:|||..|..|||..|: :...:.|||.|::
Mouse   104 ELMFDFEGRHPSTFWQSATWKEYPKPL-----QVNITLSWSKTIELTDNIV-ITFESGRPDQMIL 162

  Fly   160 YKSTDHGLSWQPFQFFSSQCRRLFGRPAR--QSTGRHNEHEARCSD------------VTRPLVS 210
            .||.|:|.:|||:|::::.|...|....:  :...:|...|..|::            :...:..
Mouse   163 EKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEYSTGYSTNSKIIHFEIKD 227

  Fly   211 RIAF---------STLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATD 266
            |.||         ::|.|:     ||::..|:|:.|.||:|:   ||.||               
Mouse   228 RFAFFAGPRLRNMASLYGQ-----LDTTKKLRDFFTVTDLRI---RLLRP--------------- 269

  Fly   267 LASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLN 331
             |.|:..|.          |.:|        :...|||||..|.||||||.||:.|..|.| :|.
Mouse   270 -AVGEIFVD----------ELHL--------ARYFYAISDIKVRGRCKCNLHATSCLYDNS-KLT 314

  Fly   332 CECSHNTAGRDCERCKPFHFDRPWA--------RATA---------------------------- 360
            |||.|||.|.||.:||..:..|||:        :.||                            
Mouse   315 CECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTPPKFNRIWPNISSLEV 379

  Fly   361 ------------------KEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRN 407
                              :.||..::|.|..|:.:|.: :::      ::..:|.:|:|:|.|::
Mouse   380 SNPKQVAPKLALSTVSSVQVANHKRDCECFGHSNRCSY-IDL------LNTVICVSCKHNTRGQH 437

  Fly   408 CHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARG 468
            |..|:.|::|:|:..|....||..|.|:|:||....||. ||.|.||.|.||..|:.|..|
Mouse   438 CELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 64/271 (24%)
EGF_Lam 312..357 CDD:238012 25/52 (48%)
EGF_Lam 369..426 CDD:238012 15/56 (27%)
EGF_Lam 431..479 CDD:238012 18/38 (47%)
NTR_netrin-1_like 545..723 CDD:239634
Ntng1XP_006502418.1 Laminin_N 71..295 CDD:365840 67/272 (25%)
EGF_Lam 296..342 CDD:238012 25/46 (54%)
EGF_Lam 406..454 CDD:238012 14/54 (26%)
EGF_Lam 462..509 CDD:214543 18/37 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3512
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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