DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and si:dkey-202e22.2

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_021335550.1 Gene:si:dkey-202e22.2 / 560497 ZFINID:ZDB-GENE-141215-27 Length:642 Species:Danio rerio


Alignment Length:765 Identity:176/765 - (23%)
Similarity:289/765 - (37%) Gaps:220/765 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLLGTTRFSPIQCISNDVYFKMFSQQAPPEDPCYNKAHEPRACIPDFVNAAYDAPVVASSTCG 70
            ::|..|...|:..:|:.                         |||.|...|.|....:...::|.
Zfish    18 MVLFPGFLNFTESRCVG-------------------------RACSPPMGNLASGRTLFTLTSCC 57

  Fly    71 SSGA-----QRYCEYQDHERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRSEPVTGSGDNVTL 130
            ::.:     |..|:.:.|                |...:.|...::..|.|.|  ...||:...:
Zfish    58 TNSSSCLPTQPRCQAELH----------------PPALMADDPFTHPDTWWGS--TAASGEQEEI 104

  Fly   131 TLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRP--ARQS--- 190
            .|.|..:|.:::|::..|  :|||.:|.:.:|.|.|.:|:..:.|:..|..:||.|  ..||   
Zfish   105 RLDLETRFCMSHVVMLFC--SPRPAAMRLERSQDFGQTWETLKLFARNCTEMFGLPDDVSQSGAV 167

  Fly   191 -TGRHNEHEARCSDVTRPLVSRIAFSTLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQ 254
             |.|::. ...||.      ..:.|.:: |..|......||.....:|.|::|:          |
Zfish   168 CTSRYSS-ALPCSR------GEVIFRSI-GLGSGIVDPYSPQALSRLTVTNLRI----------Q 214

  Fly   255 ALLSLEAGGATDLASGKYSVPLANGPA------GNNIEANL-GGDVATSGSGLHYAISDFSVGGR 312
            .|.|.:.    .::..:.|:|..:.|:      ..:::|.: ..|...|..   :|:......|.
Zfish   215 LLKSQQC----PISKSQRSIPEQSNPSFLPTVPSRSLKAPIPSSDPLDSAP---FAVYSLLAKGT 272

  Fly   313 CKCNGHASKCSTDASGQLN----------CECSHNTAGRDCERCKPFHFDRPW--ARATAKEANE 365
            |.|:|||..|..:..||.:          |.|:|:|||..||||...:.|:||  |..::.|:|.
Zfish   273 CLCHGHAEHCLPENEGQDSLQQSNVVSGKCVCAHHTAGDHCERCASLYNDQPWRAANGSSGESNS 337

  Fly   366 CKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCK 430
            |::|.|:.|:..|.|:..::..:.|:|||||.:|:|:|.||.|.:|:.|::|...:||.....|.
Zfish   338 CQKCECHGHSESCHFSQRVWLSTGGISGGVCDHCQHNTAGRRCQRCRPGYHRHPARPLNSPHACT 402

  Fly   431 ACDCHPIGS-------SGKICNSTSGQCPCKDGVTGLTCNRCARGYQQ-SRSHIAPCI------- 480
            .|.|.|.||       ....|:..||||.||.||.|.||:.|..|:.. ......||:       
Zfish   403 RCWCDPAGSVLVHSADEMPWCHPRSGQCHCKPGVGGTTCSHCLPGHWGFGEEGCKPCVCPLTCDP 467

  Fly   481 --------KQPPRMIN------MLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTEGGR 531
                    |...|:.|      :.:..:..|:.||          |.....:|..:.|:      
Zfish   468 ITGHCLDSKGSVRLYNVPIGGKIPELSHFKPQEDE----------RAWPKELAVSALYF------ 516

  Fly   532 ECGKCRVSTKRL-NLNKFC--KRDYAIMAKVI-GRDTSSEAVSREVQRRAMDPDVADYEMDQVQP 592
             .|||....|:| :....|  |..|.|.|.|: ..|..:.||..                     
Zfish   517 -TGKCSCKEKKLKSAADLCKMKHAYVIKASVLSAHDKGTHAVVL--------------------- 559

  Fly   593 GSARSPITGVYEFQAADYPNPNPNPRGSEMERFDLQIQAVFKRSRPGESSGAGNVYGMPNTTLKR 657
                                              ::::.||:..:...|.|...:|         
Zfish   560 ----------------------------------VKVRKVFRSGKLTLSQGTHTLY--------- 581

  Fly   658 GPMTWIIPTKDLECRCPRIRVNRSYLILGRDSEAPPGYLGIGPHSIVIEW 707
             |::|    ....|.||.:....|||:.|.: |...|.|.:...|:|:.|
Zfish   582 -PLSW----TSRGCTCPILNPGASYLLAGPE-EVDSGRLLVTMQSLVVLW 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 54/246 (22%)
EGF_Lam 312..357 CDD:238012 21/56 (38%)
EGF_Lam 369..426 CDD:238012 22/56 (39%)
EGF_Lam 431..479 CDD:238012 19/55 (35%)
NTR_netrin-1_like 545..723 CDD:239634 29/166 (17%)
si:dkey-202e22.2XP_021335550.1 Laminin_N 75..217 CDD:322101 41/179 (23%)
EGF_Lam 273..327 CDD:238012 21/53 (40%)
Laminin_EGF 341..394 CDD:278482 20/52 (38%)
EGF_Lam 404..456 CDD:214543 19/51 (37%)
NTR_netrin-4_like 530..640 CDD:239633 29/166 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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